RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MDP1Q86V88 176 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 PLPPR2Q96GM1 343 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 TNS1Q9HBL0 1735 aaKnown RBP4.14□□□□□ -1.75
HERC1-201ENST00000443617 NACAE9PAV3 2078 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 PPIAL4EA0A075B759 164 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 TRAV3A0A0B4J244 114 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 J3QW42 95 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 SLC25A17O43808 307 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 PPIAL4FP0DN26 164 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 FOLR3P41439 243 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 VDAC2P45880 294 aaPredicted RBP4.14□□□□□ -1.75
HERC1-201ENST00000443617 CCL7P80098 99 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 K7ERJ3 54 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 TIMM8AO60220 97 aaPredicted RBP4.14□□□□□ -1.75
HERC1-201ENST00000443617 TUSC5Q8IXB3 177 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 ZC2HC1AQ96GY0 325 aa4.14□□□□□ -1.75
HERC1-201ENST00000443617 C19orf67A6NJJ6 358 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 SIVA1O15304 175 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 FAM231DQ6ZW35 169 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 JMJD8Q96S16 334 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 SPANXB1Q9NS25 103 aaPredicted RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 PRDX2P32119 198 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 PRNTQ86SH4 94 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 SGK494Q96LW2 274 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 YLPM1P49750 1951 aaKnown RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 C3orf80F5H4A9 247 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 DLL1O00548 723 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 CEBPDP49716 269 aaPredicted RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 OR9G1Q8NH87 305 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 NCBP2LA6PVI3 153 aaKnown RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 GGTLC3B5MD39 225 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 F2RL2O00254 374 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 CXXC4Q9H2H0 198 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 LSM4Q9Y4Z0 139 aaKnown RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 VEGFBP49765 207 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 SMAD7O15105 426 aaKnown RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 OR2J3O76001 311 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 MT-CO3P00414 261 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 PLAUP00749 431 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 ZNF296Q8WUU4 475 aaPredicted RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 HIST1H4GQ99525 98 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 IFI27L2Q9H2X8 130 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 PAPPA2Q9BXP8 1791 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 GFRA3O60609 400 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 COL8A1P27658 744 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 ASPHD1Q5U4P2 390 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 LINC00473A8K010 186 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 LEPP41159 167 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 FOXF2Q12947 444 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 HES3Q5TGS1 186 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 F8W1H4 67 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 USP9XQ93008 2570 aaPredicted RBP4.13□□□□□ -1.75
HERC1-201ENST00000443617 MUC6Q6W4X9 2439 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 HCFC1P51610 2035 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 hADV38S2A0JD32 116 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 CELA2AP08217 269 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 WFDC2Q14508 124 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 LINC00205P59089 165 aa4.13□□□□□ -1.75
HERC1-201ENST00000443617 ZNF766Q5HY98 468 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 PMS2P5A8MQ11 134 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 CT83Q5H943 113 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 TMEM240Q5SV17 173 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 CCDC144NLQ6NUI1 221 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 FOXA2Q9Y261 457 aaPredicted RBP4.12□□□□□ -1.75
HERC1-201ENST00000443617 ANAPC13Q9BS18 74 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 FGF23Q9GZV9 251 aaPredicted RBP4.12□□□□□ -1.75
HERC1-201ENST00000443617 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 ZFAND6Q6FIF0 208 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 PRELID3AQ96N28 172 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 SLC25A2Q9BXI2 301 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 APOMO95445 188 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 COLCA1Q6ZS62 124 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 CFHR1Q03591 330 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 CFHR5Q9BXR6 569 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 C12orf49Q9H741 205 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 SSUH2Q9Y2M2 353 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 NEGR1Q7Z3B1 354 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 ZNF106Q9H2Y7 1883 aaKnown RBP4.12□□□□□ -1.75
HERC1-201ENST00000443617 TRAV26-1A0A087WT03 109 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 SLC25A33Q9BSK2 321 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 IGLV3-12A0A075B6K2 115 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 IGHV1-24A0A0C4DH33 117 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 Q6ZR03 302 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 TLN2Q9Y4G6 2542 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 CACNG7P62955 275 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 FAM53AQ6NSI3 398 aaPredicted RBP4.12□□□□□ -1.75
HERC1-201ENST00000443617 PLSCR4Q9NRQ2 329 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 KBTBD11-OT1A0A1B0GTJ5 212 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 WNT9BO14905 357 aa4.12□□□□□ -1.75
HERC1-201ENST00000443617 LRRK2Q5S007 2527 aa4.11□□□□□ -1.75
HERC1-201ENST00000443617 MPV17P39210 176 aa4.11□□□□□ -1.75
HERC1-201ENST00000443617 ETDBQ3ZM63 59 aa4.11□□□□□ -1.75
HERC1-201ENST00000443617 KLF17Q5JT82 389 aaPredicted RBP4.11□□□□□ -1.75
HERC1-201ENST00000443617 ZNF492Q9P255 531 aa4.11□□□□□ -1.75
HERC1-201ENST00000443617 MOSP00540 346 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms