RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 ZNF600Q6ZNG1 722 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 SMIM8Q96KF7 97 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 C19orf73Q9NVV2 129 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 UFC1Q9Y3C8 167 aa9.64□□□□□ -0.87
PDLIM2-212ENST00000443561 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 CHEK1O14757 476 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 PRAF2O60831 178 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 LY86O95711 162 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 IFNA4P05014 189 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 CD7P09564 240 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 OR10J1P30954 320 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 H2BFSP57053 126 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 DEFA1P59665 94 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 DEFA3P59666 94 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 RELQ04864 619 aaPredicted RBP9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 RAB32Q13637 225 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 FAM90A2PQ658T7 463 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 STPG3Q8N7X2 389 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 ACY3Q96HD9 319 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 C2orf50Q96LR7 162 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 GAR1Q9NY12 217 aaKnown RBP9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 PSENENQ9NZ42 101 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 MRPL27Q9P0M9 148 aaKnown RBP9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 SMPXQ9UHP9 88 aa9.63□□□□□ -0.87
PDLIM2-212ENST00000443561 FAM25EA8MYX2 175 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 H0YIZ8 118 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 PTTG1O95997 202 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 GPX4P36969 197 aaPredicted RBP9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 ZNF90Q03938 601 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 LCN12Q6JVE5 192 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 ACOT7LQ6ZUV0 252 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 THAP8Q8NA92 274 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 OR1S2Q8NGQ3 325 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 DYNLRB2Q8TF09 96 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 ST8SIA2Q92186 375 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 MARC2Q969Z3 335 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 CIB3Q96Q77 187 aaPredicted RBP9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 RNF2Q99496 336 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 PALMDQ9NP74 551 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 TECRQ9NZ01 308 aaKnown RBP9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 U3KQE9 123 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 TENM3Q9P273 2699 aa9.62□□□□□ -0.87
PDLIM2-212ENST00000443561 C5orf51A6NDU8 294 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 GOSR2O14653 212 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 TOMM40O96008 361 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 METTL15P1P0C7V9 234 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 TAS2R30P59541 319 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 LSM5Q9Y4Y9 91 aaKnown RBP9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 ALG5Q9Y673 324 aa9.61□□□□□ -0.87
PDLIM2-212ENST00000443561 IGHV3-66A0A0C4DH42 116 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 TSC22D2O75157 780 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 YIF1AO95070 293 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 PSG1P11464 419 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 CRYBB3P26998 211 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 NOXA1Q86UR1 476 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 GPN1Q9HCN4 374 aaPredicted RBP9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 PAIP2BQ9ULR5 123 aaKnown RBP9.6□□□□□ -0.87
PDLIM2-212ENST00000443561 TRAV30A0A087WSZ9 112 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 FAM24AA6NFZ4 105 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 IGHV4-30-4P0DP06 118 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 RAB11AP62491 216 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 SLC35E1Q96K37 410 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 TRGV9Q99603 122 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
PDLIM2-212ENST00000443561 TRAV14DV4A0A0A6YYC5 116 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 TSPAN4O14817 238 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 IL4P05112 153 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 FRMD6-AS1P0C7T7 363 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 CXCL3P19876 107 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 GATA2P23769 480 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 RRAS2P62070 204 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 DLK1P80370 383 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 OXA1LQ15070 435 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 ODF3L2Q3SX64 289 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 DEFB121Q5J5C9 76 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 LINC00322Q6ZN03 302 aaPredicted RBP9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 FAM24BQ8N5W8 94 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 OR51G1Q8NGK1 321 aa9.58□□□□□ -0.88
PDLIM2-212ENST00000443561 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms