RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-208	ENST00000443046	ZNF709	Q8N972	641 aa		10.15	□□□□□ -0.78
HMGN1-208	ENST00000443046	ZNRF2	Q8NHG8	242 aa		10.15	□□□□□ -0.78
HMGN1-208	ENST00000443046	BUB3	O43684	328 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	TMEM127	O75204	238 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	SCGB2A1	O75556	95 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	IGLC1	P0CG04	106 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	S100G	P29377	79 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	HRH1	P35367	487 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	OPRK1	P41145	380 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	HOXA1	P49639	335 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	UCP3	P55916	312 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	GABARAPL2	P60520	117 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	YPEL3	P61236	119 aa	Predicted RBP	10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	SPART	Q8N0X7	666 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	SLC35G3	Q8N808	338 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	C15orf53	Q8NAA6	179 aa		10.14	□□□□□ -0.79
HMGN1-208	ENST00000443046	HTN3	P15516	51 aa		10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	PSMB9	P28065	219 aa		10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	ETV6	P41212	452 aa		10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	USF2	Q15853	346 aa	Predicted RBP	10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	OR1S2	Q8NGQ3	325 aa		10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	S100A16	Q96FQ6	103 aa	Known RBP	10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	SAV1	Q9H4B6	383 aa	Predicted RBP	10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	TMED3	Q9Y3Q3	217 aa		10.13	□□□□□ -0.79
HMGN1-208	ENST00000443046	IGHV3OR16-12	A0A075B7B8	117 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	HLA-DMA	P28067	261 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	FXYD7	P58549	80 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	TAS2R20	P59543	309 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	DEFB1	P60022	68 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	DHODH	Q02127	395 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	PRSS54	Q6PEW0	395 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	SIGLEC15	Q6ZMC9	328 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	C1orf158	Q8N1D5	194 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046		Q8WTZ3	238 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	CNBD2	Q96M20	576 aa		10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.12	□□□□□ -0.79
HMGN1-208	ENST00000443046	ALDH3B2	P48448	385 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	RND3	P61587	244 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	ZNF79	Q15937	498 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	AARD	Q4LEZ3	155 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	FOXI2	Q6ZQN5	318 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	SPATA12	Q7Z6I5	190 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	FCGR1B	Q92637	280 aa		10.11	□□□□□ -0.79
HMGN1-208	ENST00000443046	LOC102723971	A0A1B0GUV8	181 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	IL4	P05112	153 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	OR10J1	P30954	320 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	PRSS3	P35030	304 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	TSPAN5	P62079	268 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	UBE2NL	Q5JXB2	153 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	TMEM69	Q5SWH9	247 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	GPX8	Q8TED1	209 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	TP53RK	Q96S44	253 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	SLC35B3	Q9H1N7	401 aa		10.1	□□□□□ -0.79
HMGN1-208	ENST00000443046	SRRM2	Q9UQ35	2752 aa	Known RBP	10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046		A0A0G2JRQ6	117 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	NXPH3	O95157	252 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	IGKV3-20	P01619	116 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	HBE1	P02100	147 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	SLC25A4	P12235	298 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	HSPA13	P48723	471 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	RND2	P52198	227 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	PAX9	P55771	341 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	DAD1	P61803	113 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	ATG101	Q9BSB4	218 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	PDCD10	Q9BUL8	212 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	WDR12	Q9GZL7	423 aa	Known RBP	10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	GOLT1B	Q9Y3E0	138 aa		10.09	□□□□□ -0.79
HMGN1-208	ENST00000443046	LOC100506127	A0A0U1RQW1	187 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	SOCS3	O14543	225 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	GSTZ1	O43708	216 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	TOMM40	O96008	361 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	HTR2B	P41595	481 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	KRTAP10-2	P60368	255 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	C2orf83	Q53S99	150 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	SPATA31B1P	Q5VZV4	182 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	GSG1L	Q6UXU4	331 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	TMEM170A	Q8WVE7	144 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	ZNF486	Q96H40	463 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	SCPEP1	Q9HB40	452 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	ENY2	Q9NPA8	101 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046	KLK11	Q9UBX7	282 aa		10.08	□□□□□ -0.8
HMGN1-208	ENST00000443046		A8MTW9	85 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	ATG12	O94817	140 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	RD3L	P0DJH9	198 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	PSMB3	P49720	205 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	AKR1C2	P52895	323 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	SPCS3	P61009	180 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	PSG9	Q00887	426 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	RRN3P1	Q2M238	152 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	IZUMO2	Q6UXV1	221 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	CROCCP3	Q8IVE0	287 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	OR52E5	Q8NH55	327 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	LINC00588	Q9Y4M8	146 aa		10.07	□□□□□ -0.8
HMGN1-208	ENST00000443046	PI3	P19957	117 aa		10.06	□□□□□ -0.8
HMGN1-208	ENST00000443046	BTF3	P20290	206 aa	Known RBP	10.06	□□□□□ -0.8
HMGN1-208	ENST00000443046	RORC	P51449	518 aa		10.06	□□□□□ -0.8
HMGN1-208	ENST00000443046	PIGP	P57054	158 aa		10.06	□□□□□ -0.8
HMGN1-208	ENST00000443046	LHFPL1	Q86WI0	220 aa		10.06	□□□□□ -0.8

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