RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 NHLRC2Q8NBF2 726 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
LTBR-203ENST00000441074 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
LTBR-203ENST00000441074 S1PR3Q99500 378 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 SSBP4Q9BWG4 385 aaPredicted RBP9.69□□□□□ -0.86
LTBR-203ENST00000441074 ENY2Q9NPA8 101 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 DUSP13Q9UII6 198 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 COL12A1Q99715 3063 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 A0A1B0GXF2 115 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 CORTO00230 105 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 CIDEAO60543 219 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 C8orf88P0DMB2 117 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 S100A7P31151 101 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
LTBR-203ENST00000441074 ALKBH6Q3KRA9 238 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 TPRX1Q8N7U7 411 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 MS4A6AQ9H2W1 248 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 PRORYQ9H606 182 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
LTBR-203ENST00000441074 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 C11orf53Q8IXP5 236 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 KLF14Q8TD94 323 aaPredicted RBP9.68□□□□□ -0.86
LTBR-203ENST00000441074 FAM234AQ9H0X4 552 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 MEGF9Q9H1U4 602 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 HCFC1P51610 2035 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 NBASA2RRP1 2371 aa9.68□□□□□ -0.86
LTBR-203ENST00000441074 TET2Q6N021 2002 aaPredicted RBP9.67□□□□□ -0.86
LTBR-203ENST00000441074 SH2D7A6NKC9 451 aaPredicted RBP9.67□□□□□ -0.86
LTBR-203ENST00000441074 LEPROTL1O95214 131 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 IGHV1-2P23083 117 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 KIR2DL2P43627 348 aaPredicted RBP9.67□□□□□ -0.86
LTBR-203ENST00000441074 ZNF826PQ6ZT77 177 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 SEM1Q6ZVN7 128 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 FAM90A1Q86YD7 464 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 SLC25A33Q9BSK2 321 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 ZNF835Q9Y2P0 537 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 HIGD1CA8MV81 97 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 AGFG2O95081 481 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 TFF1P04155 84 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 NBEAP1P0C6P0 100 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 FAM87AP0C7U9 286 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 TMEM11P17152 192 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 CAMPP49913 170 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 ARF6P62330 175 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 LTC4SQ16873 150 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 RPL39P5Q59GN2 51 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 Q6ZS92 163 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 DCTN5Q9BTE1 182 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 IDI2-AS1Q9NZ38 188 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 GNG12Q9UBI6 72 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 JPT1Q9UK76 154 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 CACNA1DQ01668 2161 aa9.67□□□□□ -0.86
LTBR-203ENST00000441074 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
LTBR-203ENST00000441074 MPV17P39210 176 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 MZT1Q08AG7 82 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 PRR30Q53SZ7 412 aaPredicted RBP9.66□□□□□ -0.86
LTBR-203ENST00000441074 ASPHD1Q5U4P2 390 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 IGFL3Q6UXB1 125 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 WDR82Q6UXN9 313 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 DDB2Q92466 427 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
LTBR-203ENST00000441074 SH3BGRL2Q9UJC5 107 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 AMMECR1Q9Y4X0 333 aaPredicted RBP9.66□□□□□ -0.86
LTBR-203ENST00000441074 ZFYVE26Q68DK2 2539 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 GPR183P32249 361 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 SSX8Q7RTT4 187 aa9.66□□□□□ -0.86
LTBR-203ENST00000441074 CXorf67Q86X51 503 aaPredicted RBP9.66□□□□□ -0.86
LTBR-203ENST00000441074 LOC102724200A0A096LPH7 203 aaPredicted RBP9.65□□□□□ -0.86
LTBR-203ENST00000441074 VWC2LB2RUY7 222 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 HOXC12P31275 282 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 TCF24Q7RTU0 167 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 FER1L6-AS1Q8NA97 138 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 SARAFQ96BY9 339 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 PLPPR2Q96GM1 343 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 FAM167A-AS1Q96KT0 104 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
LTBR-203ENST00000441074 A0A087X0K7 114 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 C7orf71A4D174 169 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 GAGE10A6NGK3 116 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 PEX7O00628 323 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 TIMM8AO60220 97 aaPredicted RBP9.65□□□□□ -0.87
LTBR-203ENST00000441074 SEC11AP67812 179 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.87
LTBR-203ENST00000441074 HBBP68871 147 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 HOXA4Q00056 320 aaPredicted RBP9.65□□□□□ -0.87
LTBR-203ENST00000441074 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 Q6ZT83 130 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 C1orf162Q8NEQ5 155 aaPredicted RBP9.65□□□□□ -0.87
LTBR-203ENST00000441074 SLC25A2Q9BXI2 301 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 C7orf69Q9H7B7 122 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms