RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF295-AS1Q8N0V1 137 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 KLF14Q8TD94 323 aaPredicted RBP13.03□□□□□ -0.32
DHFR-201ENST00000439211 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
DHFR-201ENST00000439211 OSTCQ9NRP0 149 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 A0A1W2PPM0 123 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
DHFR-201ENST00000439211 SRSF8Q9BRL6 282 aaKnown RBP13.03□□□□□ -0.32
DHFR-201ENST00000439211 GUSBP1Q15486 140 aa13.02□□□□□ -0.32
DHFR-201ENST00000439211 ZNF718Q3SXZ3 478 aa13.02□□□□□ -0.32
DHFR-201ENST00000439211 TIMM23BQ5SRD1 257 aa13.02□□□□□ -0.32
DHFR-201ENST00000439211 A0A1B0GWB2 263 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 SPINK8P0C7L1 97 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 S1PR3Q99500 378 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 HSD17B10Q99714 261 aaKnown RBP13.02□□□□□ -0.33
DHFR-201ENST00000439211 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 MPV17P39210 176 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 ZNF138P52744 262 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 Q6P435 159 aa13.02□□□□□ -0.33
DHFR-201ENST00000439211 COL4A2P08572 1712 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 IGHV3OR15-7A0A075B7D8 119 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 RRHO14718 337 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 STAG3L2P0CL84 134 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 HERV-K104P63124 156 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 DAZAP2Q15038 168 aaPredicted RBP13.01□□□□□ -0.33
DHFR-201ENST00000439211 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 CSN1S1P47710 185 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 KRTAP27-1Q3LI81 207 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 JMJD8Q96S16 334 aa13.01□□□□□ -0.33
DHFR-201ENST00000439211 PCNX2A6NKB5 2137 aa13□□□□□ -0.33
DHFR-201ENST00000439211 C2orf70A6NJV1 201 aa13□□□□□ -0.33
DHFR-201ENST00000439211 CD24P25063 80 aa13□□□□□ -0.33
DHFR-201ENST00000439211 LEAP2Q969E1 77 aa13□□□□□ -0.33
DHFR-201ENST00000439211 COL5A1P20908 1838 aaPredicted RBP13□□□□□ -0.33
DHFR-201ENST00000439211 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
DHFR-201ENST00000439211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13□□□□□ -0.33
DHFR-201ENST00000439211 ATP5G2Q06055 141 aa13□□□□□ -0.33
DHFR-201ENST00000439211 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
DHFR-201ENST00000439211 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
DHFR-201ENST00000439211 MRPL16Q9NX20 251 aaKnown RBP13□□□□□ -0.33
DHFR-201ENST00000439211 RABAC1Q9UI14 185 aa13□□□□□ -0.33
DHFR-201ENST00000439211 B5MCH6 92 aa13□□□□□ -0.33
DHFR-201ENST00000439211 C9JCJ5 164 aa13□□□□□ -0.33
DHFR-201ENST00000439211 TMEM95Q3KNT9 176 aa13□□□□□ -0.33
DHFR-201ENST00000439211 CCDC144NLQ6NUI1 221 aa13□□□□□ -0.33
DHFR-201ENST00000439211 SGK494Q96LW2 274 aa13□□□□□ -0.33
DHFR-201ENST00000439211 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
DHFR-201ENST00000439211 SPRY3O43610 288 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 SH2D6Q7Z4S9 175 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 ABHD12Q8N2K0 398 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 OR13A1Q8NGR1 328 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 CXXC4Q9H2H0 198 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 PLCE1Q9P212 2302 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 C21orf140B9A014 251 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 NEGR1Q7Z3B1 354 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 WDR86Q86TI4 376 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 VSTM5A8MXK1 200 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 ZBTB34Q8NCN2 500 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 FRYQ5TBA9 3013 aa12.99□□□□□ -0.33
DHFR-201ENST00000439211 SMIM20Q8N5G0 67 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 SMPXQ9UHP9 88 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 WDR83OSQ9Y284 106 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 FOXH1O75593 365 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 COX8AP10176 69 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 ACP1P24666 158 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 SCRT2Q9NQ03 307 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 MBNL3Q9NUK0 354 aaKnown RBP12.98□□□□□ -0.33
DHFR-201ENST00000439211 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 MPDU1O75352 247 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 CITED1Q99966 193 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 MS4A5Q9H3V2 200 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 NHP2Q9NX24 153 aaKnown RBP12.98□□□□□ -0.33
DHFR-201ENST00000439211 ACACAQ13085 2346 aa12.98□□□□□ -0.33
DHFR-201ENST00000439211 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CYSLTR1Q9Y271 337 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 A6NJY4 79 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 SHISA2Q6UWI4 295 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 PRDX2P32119 198 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CT45A1Q5HYN5 189 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 TCF24Q7RTU0 167 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 CT45A3Q8NHU0 189 aa12.97□□□□□ -0.33
DHFR-201ENST00000439211 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 FAM214BQ7L5A3 538 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 ARPC1AQ92747 370 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 PGLYRP4Q96LB8 373 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 MED13LQ71F56 2210 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 M0R1B8 84 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 WFDC2Q14508 124 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 RAB1CQ92928 201 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 SPRR3Q9UBC9 169 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
DHFR-201ENST00000439211 IGHV1-24A0A0C4DH33 117 aa12.96□□□□□ -0.34
DHFR-201ENST00000439211 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms