RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 GINS4Q9BRT9 223 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 THTPAQ9BU02 230 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 MED28Q9H204 178 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF586Q9NXT0 402 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 TAS2R8Q9NYW2 309 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 RPUSD1Q9UJJ7 312 aaKnown RBP2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF443Q9Y2A4 671 aaPredicted RBP2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 PXMP4Q9Y6I8 212 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 LTN1O94822 1766 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 TOPBP1Q92547 1522 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 DCCP43146 1447 aa2.17□□□□□ -2.06
LSM1P1-201ENST00000438629 CCDC88AQ3V6T2 1871 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 KMT2EQ8IZD2 1858 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 TRBV19A0A075B6N1 114 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 A0A1W2PRS3 328 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 BBIP1A8MTZ0 92 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 TMEM250H0YL14 139 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 GABARAPH6UMI1 98 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 PIRO00625 290 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 BPY2O14599 106 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 PDCD5O14737 125 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 NCR2O95944 276 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF286BP0CG31 522 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 OR10J1P30954 320 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 CCR2P41597 374 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 FOXA1P55317 472 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 GABARAPL2P60520 117 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 EIF5AP63241 154 aaKnown RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 DEFA5Q01523 94 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 VMA21Q3ZAQ7 101 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MEIG1Q5JSS6 88 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 AMMECR1LQ6DCA0 310 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF880Q6PDB4 577 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 IGFL1Q6UW32 110 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 SBSNQ6UWP8 590 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LCN15Q6UWW0 184 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 TMEM14EPQ6UXP3 125 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ZNF705AQ6ZN79 300 aaPredicted RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ATP5L2Q7Z4Y8 100 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LHFPL1Q86WI0 220 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 PDPNQ86YL7 162 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LYPD1Q8N2G4 141 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LINC00471Q8N535 108 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 TTC9CQ8N5M4 171 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ZIC4Q8N9L1 334 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 OR4C16Q8NGL9 310 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 SLC25A40Q8TBP6 338 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LMX1AQ8TE12 382 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MAGOHBQ96A72 148 aaKnown RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 FXYD5Q96DB9 178 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MS4A6EQ96DS6 147 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 HYLS1Q96M11 299 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 SLC25A21Q9BQT8 299 aaPredicted RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MIEN1Q9BRT3 115 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 CHCHD7Q9BUK0 85 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 FGF23Q9GZV9 251 aaPredicted RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 CA10Q9NS85 328 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 LAMTOR3Q9UHA4 124 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ANAPC10Q9UM13 185 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 FUT9Q9Y231 359 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 AMMECR1Q9Y4X0 333 aaPredicted RBP2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 AP4S1Q9Y587 144 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MYH4Q9Y623 1939 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 ARAP2Q8WZ64 1704 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MROH1Q8NDA8 1641 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 MAPKBP1O60336 1514 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 NUP210LQ5VU65 1888 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 CDK5RAP2Q96SN8 1893 aa2.16□□□□□ -2.06
LSM1P1-201ENST00000438629 PARP14Q460N5 1801 aa2.15□□□□□ -2.06
LSM1P1-201ENST00000438629 KNDC1Q76NI1 1749 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 COLCA2A8K830 154 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 OR2T1O43869 369 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 HLA-DQA1P01909 254 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 APCSP02743 223 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 SPINK8P0C7L1 97 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 PPIBP23284 216 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 FKBP2P26885 142 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 PSMB3P49720 205 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 CATR1Q13166 79 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 EIF3IQ13347 325 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 MOBPQ13875 183 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 CST6Q15828 149 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 IQCJQ1A5X6 159 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 KHDC3LQ587J8 217 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 TMEM244Q5VVB8 128 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 EIF5AL1Q6IS14 154 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 IZUMO2Q6UXV1 221 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 LRP11Q86VZ4 500 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 PRR15Q8IV56 129 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 HIST3H2BBQ8N257 126 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 LINC00337Q8N6G1 96 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 OR5D14Q8NGL3 314 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 OR8D4Q8NGM9 314 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 FAM57AQ8TBR7 257 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 MRPS24Q96EL2 167 aaKnown RBP2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 BORCS8Q96FH0 119 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 SDF2Q99470 211 aa2.15□□□□□ -2.07
LSM1P1-201ENST00000438629 VAMP8Q9BV40 100 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms