RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
UBE3B-203ENST00000434735 C1QTNF4Q9BXJ3 329 aa10.03□□□□□ -0.8
UBE3B-203ENST00000434735 JKAMPQ9P055 326 aa10.03□□□□□ -0.8
UBE3B-203ENST00000434735 IGHV2-70DA0A0C4DH43 119 aa10.02□□□□□ -0.8
UBE3B-203ENST00000434735 F5H768 121 aa10.02□□□□□ -0.8
UBE3B-203ENST00000434735 HLA-DRB1P01911 266 aa10.02□□□□□ -0.8
UBE3B-203ENST00000434735 CXCL3P19876 107 aa10.02□□□□□ -0.8
UBE3B-203ENST00000434735 NDPQ00604 133 aa10.02□□□□□ -0.8
UBE3B-203ENST00000434735 ELF5Q9UKW6 265 aaPredicted RBP10.02□□□□□ -0.8
UBE3B-203ENST00000434735 K7ERU9 68 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 ZFP36P26651 326 aaKnown RBP10.02□□□□□ -0.81
UBE3B-203ENST00000434735 HGFACQ04756 655 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 EIF3GO75821 320 aaKnown RBP eCLIP10.02□□□□□ -0.81
UBE3B-203ENST00000434735 PRB4P10163 310 aaPredicted RBP10.02□□□□□ -0.81
UBE3B-203ENST00000434735 HOXA5P20719 270 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
UBE3B-203ENST00000434735 FAM71F2Q6NXP2 309 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 BIVMQ86UB2 503 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 KCNS1Q96KK3 526 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 MRPS18AQ9NVS2 196 aaKnown RBP10.02□□□□□ -0.81
UBE3B-203ENST00000434735 GPR132Q9UNW8 380 aa10.02□□□□□ -0.81
UBE3B-203ENST00000434735 TRGV1A0A0A0MS02 117 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 FOLR2P14207 255 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 AGAP20933 346 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 B3GALT5-AS1P59052 145 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 LINC00862A6NCI5 91 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 TNFSF13O75888 250 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 PRTN3P24158 256 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 UBE2E1P51965 193 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 FOXC2Q99958 501 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 TRAF4Q9BUZ4 470 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-203ENST00000434735 PRO3102Q9H379 93 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
UBE3B-203ENST00000434735 YPEL1O60688 119 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 C1orf100Q5SVJ3 147 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 YPEL2Q96QA6 119 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 SPOCK3Q9BQ16 436 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 MRPL18Q9H0U6 180 aaKnown RBP10.01□□□□□ -0.81
UBE3B-203ENST00000434735 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 NBEAP1P0C6P0 100 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 EFNB1P98172 346 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 FOXB2Q5VYV0 432 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 MIXL1Q9H2W2 232 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 V9GYH0 126 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 ARID2Q68CP9 1835 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 NCOR2Q9Y618 2525 aa10.01□□□□□ -0.81
UBE3B-203ENST00000434735 GREB1LQ9C091 1923 aaPredicted RBP10□□□□□ -0.81
UBE3B-203ENST00000434735 BUB1B-PAK6H3BSN5 160 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 DEFB112Q30KQ8 113 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 FBLN7Q53RD9 439 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 SIGLEC15Q6ZMC9 328 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 F11RQ9Y624 299 aaKnown RBP10□□□□□ -0.81
UBE3B-203ENST00000434735 MUC21A0A0G2JKD1 596 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 MUC21A0A140T8X8 626 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 OVOL3O00110 214 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 PLP1P60201 277 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 ADORA2A-AS1P86434 159 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 C8orf82Q6P1X6 216 aaPredicted RBP10□□□□□ -0.81
UBE3B-203ENST00000434735 TMEM160Q9NX00 188 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 SPG11Q96JI7 2443 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 TSPAN13O95857 204 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 CFHR2P36980 270 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 SLC25A34Q6PIV7 304 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 LHFPL4Q7Z7J7 247 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 GAFA1Q96PS6 74 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 OR5AC2Q9NZP5 309 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 ATP5LO75964 103 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 APOC4P55056 127 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 DAD1P61803 113 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 TTC32Q5I0X7 151 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 ZNF362Q5T0B9 420 aaPredicted RBP10□□□□□ -0.81
UBE3B-203ENST00000434735 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
UBE3B-203ENST00000434735 CACNA1DQ01668 2161 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 PARLQ9H300 379 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 MED13LQ71F56 2210 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 MDKP21741 143 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-203ENST00000434735 SRIP30626 198 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 SPATA45Q537H7 98 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 LRTM2Q8N967 370 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 GCHFRP30047 84 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 P2RY4P51582 365 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 HBBP68871 147 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 C5orf64Q2M2E5 130 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 ZNF660Q6AZW8 331 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-203ENST00000434735 TMEM136Q6ZRR5 245 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 CD177Q8N6Q3 437 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 CDK2AP2O75956 126 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 OR11H7Q8NGC8 314 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 SFRP2Q96HF1 295 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 HS3ST6Q96QI5 342 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 PTPRFP10586 1907 aa9.99□□□□□ -0.81
UBE3B-203ENST00000434735 IGHV4-61A0A0C4DH41 118 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms