RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ISOC2Q96AB3 205 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 NIPSNAP3BQ9BS92 247 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 DOK5Q9P104 306 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 PTPN13Q12923 2485 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 CENPVL3A0A0U1RRI6 287 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 ATP5G3P48201 142 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 CST9LP1Q5W188 147 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
USHBP1-203ENST00000431146 TBL2Q9Y4P3 447 aaKnown RBP13.24□□□□□ -0.29
USHBP1-203ENST00000431146 OOSP1A8MZH6 123 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 C11orf94C9JXX5 98 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 NDUFS8O00217 210 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 CXorf1O96002 111 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 TMEM37Q8WXS4 190 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 MALSU1Q96EH3 234 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 WNT10AQ9GZT5 417 aa13.24□□□□□ -0.29
USHBP1-203ENST00000431146 GSX1Q9H4S2 264 aaPredicted RBP13.24□□□□□ -0.29
USHBP1-203ENST00000431146 NPFFO15130 113 aa13.23□□□□□ -0.29
USHBP1-203ENST00000431146 MT-CO2P00403 227 aa13.23□□□□□ -0.29
USHBP1-203ENST00000431146 Q8N6K4 173 aa13.23□□□□□ -0.29
USHBP1-203ENST00000431146 TVP23CQ96ET8 276 aa13.23□□□□□ -0.29
USHBP1-203ENST00000431146 POLR3KQ9Y2Y1 108 aaPredicted RBP13.23□□□□□ -0.29
USHBP1-203ENST00000431146 NBPF19A0A087WUL8 3843 aa13.23□□□□□ -0.29
USHBP1-203ENST00000431146 GCHFRP30047 84 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 NDPQ00604 133 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 PAX8Q06710 450 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 RHEBQ15382 184 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 MORN5Q5VZ52 161 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 OR51G1Q8NGK1 321 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 SMCO4Q9NRQ5 59 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 TCRBV4S1A1TA0A5B7 111 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 ZNF727A8MUV8 499 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 CRYGCP07315 174 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 TAGLN2P37802 199 aaKnown RBP13.22□□□□□ -0.29
USHBP1-203ENST00000431146 CX3CL1P78423 397 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 KLF17Q5JT82 389 aaPredicted RBP13.22□□□□□ -0.29
USHBP1-203ENST00000431146 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 THAP8Q8NA92 274 aa13.22□□□□□ -0.29
USHBP1-203ENST00000431146 NUTF2P61970 127 aaKnown RBP13.21□□□□□ -0.29
USHBP1-203ENST00000431146 EBI3Q14213 229 aa13.21□□□□□ -0.29
USHBP1-203ENST00000431146 TMEM249Q2WGJ8 235 aa13.21□□□□□ -0.29
USHBP1-203ENST00000431146 SMIM7Q9BQ49 75 aa13.21□□□□□ -0.29
USHBP1-203ENST00000431146 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.29
USHBP1-203ENST00000431146 TRAV40A0A0B4J280 105 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 NPPCP23582 126 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 UHRF2Q96PU4 802 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 PARLQ9H300 379 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.3
USHBP1-203ENST00000431146 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 TRAV5A0A0B4J249 113 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 PSMB11A5LHX3 300 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 C1orf196B1AJZ1 125 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 ZNF503Q96F45 646 aa13.2□□□□□ -0.3
USHBP1-203ENST00000431146 A6NJY4 79 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 OR5G3P0C626 314 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 ASPHD1Q5U4P2 390 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 ZFP82Q8N141 532 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 OR4X1Q8NH49 305 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 ARPC1AQ92747 370 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 S4R3C0 116 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 COLCA2A8K830 154 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 I3L2K1 104 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 CORTO00230 105 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 COX7A2P2O60397 106 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 OR7C2O60412 319 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 OR10J4P0C629 311 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 Q8N9W7 124 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 TMEM116Q8NCL8 245 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 SDF2L1Q9HCN8 221 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
USHBP1-203ENST00000431146 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
USHBP1-203ENST00000431146 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 CYB5R2Q6BCY4 276 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
USHBP1-203ENST00000431146 SH2D7A6NKC9 451 aaPredicted RBP13.18□□□□□ -0.3
USHBP1-203ENST00000431146 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 PAX1P15863 534 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 ORM2P19652 201 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 BRS3P32247 399 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 FABP9Q0Z7S8 132 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 MAJINQ3KP22 176 aa13.18□□□□□ -0.3
USHBP1-203ENST00000431146 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
USHBP1-203ENST00000431146 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
USHBP1-203ENST00000431146 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 NDUFB4O95168 129 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 MSMBP08118 114 aa13.17□□□□□ -0.3
USHBP1-203ENST00000431146 ADIRFQ15847 76 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms