RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 P0C879 139 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 NHP2Q9NX24 153 aaKnown RBP7.25□□□□□ -1.25
CDC42BPA-206ENST00000429440 K7ERJ3 54 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGLV3-19P01714 112 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 CXCL12P48061 93 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 FOXG1P55316 489 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 FOXA3P55318 350 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 C1orf61Q13536 156 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 DAZAP2Q15038 168 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 TAL2Q16559 108 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 C3AR1Q16581 482 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 ANXA2RQ3ZCQ2 193 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 Q6ZS52 159 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 CEND1Q8N111 149 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 TMEM116Q8NCL8 245 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 ST8SIA1Q92185 356 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 HIGD1CA8MV81 97 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 WISP1O95388 367 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 NCR2O95944 276 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 RBP4P02753 201 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 CELA2AP08217 269 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZNF688P0C7X2 276 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 AMTNQ6UX39 209 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 Q6ZR03 302 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 PIP4P2Q8N4L2 257 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 SNRNP40Q96DI7 357 aaKnown RBP7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 SSBP3Q9BWW4 388 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZNF355PQ9NSJ1 428 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 MDFICQ9P1T7 246 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 CFAP54Q96N23 3096 aa7.24□□□□□ -1.25
CDC42BPA-206ENST00000429440 NPIPB11E5RHQ5 1161 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 MOSP00540 346 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 BCL3P20749 454 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 ASIPP42127 132 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 CLRN1P58418 232 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 RPL30P62888 115 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 FAM159AQ6UWV7 190 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TREML4Q6UXN2 200 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TMUB1Q9BVT8 246 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 SEC16AO15027 2179 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TRBV20-1A0A075B6N2 111 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 TRBV6-6A0A0A6YYG2 114 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZG16O60844 167 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 IGLV2-14P01704 120 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 DSCR4P56555 118 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 HHEXQ03014 270 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 EFNB3Q15768 340 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 RBMXL3Q8N7X1 1067 aaKnown RBP7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 OR5AN1Q8NGI8 311 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 CHAC1Q9BUX1 264 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 EMC6Q9BV81 110 aa7.23□□□□□ -1.25
CDC42BPA-206ENST00000429440 CLPSP04118 112 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 CDAP32320 146 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 FBXW4P57775 412 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 TM4SF20Q53R12 229 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 ZNF808Q8N4W9 903 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 GJC3Q8NFK1 279 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 CARD19Q96LW7 228 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 MGST2Q99735 147 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 C15orf62A8K5M9 175 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 SNCGO76070 127 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 MYF5P13349 255 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 MFAP5Q13361 173 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 MIC13Q5XKP0 118 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 LRRC75A-AS1Q8N1F1 130 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 RASL10AQ92737 203 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 LINC00479Q96M42 142 aa7.22□□□□□ -1.25
CDC42BPA-206ENST00000429440 RP1P56715 2156 aa7.21□□□□□ -1.25
CDC42BPA-206ENST00000429440 ASXL3Q9C0F0 2248 aa7.21□□□□□ -1.25
CDC42BPA-206ENST00000429440 FER1L5A0AVI2 2057 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 SHISA9B4DS77 424 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 MYOD1P15172 320 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 NMUP48645 174 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 RPRMLQ8N4K4 120 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 DLX4Q92988 240 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 HSD17B10Q99714 261 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 DLL3Q9NYJ7 618 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 F11RQ9Y624 299 aaKnown RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 WDFY3Q8IZQ1 3526 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 TNRC18O15417 2968 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 A0A1W2PPC4 97 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 FRG2CA6NGY1 282 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 C15orf65H3BRN8 121 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 PRKNO60260 465 aaPredicted RBP7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 CSN3P07498 182 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 HLA-DRB4P13762 266 aa7.21□□□□□ -1.26
CDC42BPA-206ENST00000429440 CD27P26842 260 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms