RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 IGKV1OR2-108A0A075B7D4 117 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 A0A087WWC5 75 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 PMS2P5A8MQ11 134 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 H3BQ15 152 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 SMIM6P0DI80 62 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 B2MP61769 119 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 HAGHQ16775 308 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 SLC25A24Q6NUK1 477 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 RBMS3Q6XE24 437 aaKnown RBP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 SLC24A4Q8NFF2 622 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR10G4Q8NGN3 311 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 VSTM2AQ8TAG5 236 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 FAM216AQ8WUB2 273 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 DUX3Q96PT4 197 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 PUS1Q9Y606 427 aaKnown RBP eCLIP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 UBE2L5PA0A1B0GUS4 154 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR2C1O95371 312 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 S100A6P06703 90 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR8U8P0C7N1 319 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 KHDC3LQ587J8 217 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 ACY3Q96HD9 319 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
HMGCLL1-206ENST00000428842 LOC102723971A0A1B0GUV8 181 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 IFNA5P01569 189 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 TRBV12-3P01733 135 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 NPY1RP25929 384 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 RAB2AP61019 212 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 SLC35E3Q7Z769 313 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR5B3Q8NH48 314 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 PARD6GQ9BYG4 376 aaPredicted RBP7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF702PQ9H963 129 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 CDC42EP3Q9UKI2 254 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 NBEAL2Q6ZNJ1 2754 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 NDUFB8O95169 186 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 HLA-DRB1P01911 266 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 HNF1AP20823 631 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 OPRK1P41145 380 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 FABP9Q0Z7S8 132 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 GCSAMLQ5JQS6 135 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 Q6ZSV7 163 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 MBD3L1Q8WWY6 194 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 PSMG3Q9BT73 122 aaPredicted RBP7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 ENY2Q9NPA8 101 aa7.44□□□□□ -1.22
HMGCLL1-206ENST00000428842 AP4M1O00189 453 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 SLC38A11Q08AI6 406 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 AARDQ4LEZ3 155 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 TMEM14EPQ6UXP3 125 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 TVP23CQ96ET8 276 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 TCEAL7Q9BRU2 100 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 A0A1W2PRX2 142 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 CXorf65A6NEN9 183 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 FAM90A26D6RGX4 464 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 PRSS46E5RG02 174 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 HMGB3O15347 200 aaKnown RBP7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 MT-CO2P00403 227 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 DLK1P80370 383 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF90Q03938 601 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 DEFB136Q30KP8 78 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 LILRB2Q8N423 598 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 C1RLQ9NZP8 487 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF257Q9Y2Q1 563 aa7.43□□□□□ -1.22
HMGCLL1-206ENST00000428842 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 CRLF1O75462 422 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 MDKP21741 143 aaPredicted RBP7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 TAGLN2P37802 199 aaKnown RBP7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 ELOBQ15370 118 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 RPRMQ9NS64 109 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 SERTAD4Q9NUC0 356 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR2T8A6NH00 312 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF727A8MUV8 499 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 PPP5D1E7EU14 171 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 IGHG2P01859 326 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 PF4V1P10720 104 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 EDN2P20800 178 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 SERF2P84101 59 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 GAMTQ14353 236 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 FAM90A2PQ658T7 463 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 SCGB1C1Q8TD33 95 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 RNF5Q99942 180 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 ANK2Q01484 3957 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 DNHD1Q96M86 4753 aa7.42□□□□□ -1.22
HMGCLL1-206ENST00000428842 B4DEV8 164 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 S100A9P06702 114 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 RND2P52198 227 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 ELLP55199 621 aaPredicted RBP7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 HBG1P69891 147 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 HBG2P69892 147 aa7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
HMGCLL1-206ENST00000428842 PMS2P11Q13670 270 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms