RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TBL2Q9Y4P3 447 aaKnown RBP6.84□□□□□ -1.31
HDAC1-202ENST00000428704 STAB2Q8WWQ8 2551 aa6.84□□□□□ -1.31
HDAC1-202ENST00000428704 HUWE1Q7Z6Z7 4374 aaKnown RBP6.83□□□□□ -1.32
HDAC1-202ENST00000428704 SRRM4A7MD48 611 aaKnown RBP6.83□□□□□ -1.32
HDAC1-202ENST00000428704 SEC14L6B5MCN3 397 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 RRHO14718 337 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 TSPAN4O14817 238 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IFNA1P01562 189 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IFNA10P01566 189 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IGKV1D-33P01593 117 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IGKV1-33P01594 117 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IGLV1-47P01700 117 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 IL3RAP26951 378 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 MAS1LP35410 378 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 OPRK1P41145 380 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 LGALS7P47929 136 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 RAB13P51153 203 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 PRRX1P54821 245 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 KRTAP10-11P60412 298 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 ACOT6Q3I5F7 207 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-202ENST00000428704 C2orf83Q53S99 150 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 ACSM6Q6P461 480 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 VKORC1L1Q8N0U8 176 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 ABHD12Q8N2K0 398 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 KLHDC1Q8N7A1 406 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 SLC24A4Q8NFF2 622 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 OR4P4Q8NGL7 312 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM167AQ8TBQ9 72 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM170AQ8WVE7 144 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 FLYWCH2Q96CP2 140 aaKnown RBP6.83□□□□□ -1.32
HDAC1-202ENST00000428704 RNF5Q99942 180 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 CLEC7AQ9BXN2 247 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 KCNIP2Q9NS61 270 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 SLC39A9Q9NUM3 307 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 VAX2Q9UIW0 290 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 SIGLEC9Q9Y336 463 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 LSM4Q9Y4Z0 139 aaKnown RBP6.83□□□□□ -1.32
HDAC1-202ENST00000428704 OR51B2Q9Y5P1 312 aa6.83□□□□□ -1.32
HDAC1-202ENST00000428704 A0A087WWC5 75 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 TEX50A0A1B0GTY4 177 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 C7orf77A4D0Y5 90 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 IGKV1-16P04430 117 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 BCL2P10415 239 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 NPY1RP25929 384 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 LGALS4P56470 323 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 SSX2Q16385 188 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 RNF212Q495C1 297 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 SLC35E3Q7Z769 313 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 C15orf54Q8N8G6 183 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 OR10G9Q8NGN4 311 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 OR10G7Q8NGN6 311 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 OR1L8Q8NGR8 309 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 OR10X1Q8NGY0 326 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 CACNG8Q8WXS5 425 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 MALSU1Q96EH3 234 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 MRPL20Q9BYC9 149 aaKnown RBP6.82□□□□□ -1.32
HDAC1-202ENST00000428704 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 ENY2Q9NPA8 101 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 NDUFA4L2Q9NRX3 87 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 WASHC3Q9Y3C0 194 aa6.82□□□□□ -1.32
HDAC1-202ENST00000428704 STARD9Q9P2P6 4700 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 A0A1W2PN81 502 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 A6NDX4 124 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 B4DEV8 164 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 IFNA4P05014 189 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 SAA1P0DJI8 122 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-202ENST00000428704 FOLR2P14207 255 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 CHRNA7P36544 502 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 RPL29P47914 159 aaKnown RBP6.81□□□□□ -1.32
HDAC1-202ENST00000428704 HOXA1P49639 335 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-202ENST00000428704 PSMB3P49720 205 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-202ENST00000428704 HAGHQ16775 308 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 HLA-DRB5Q30154 266 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 FFAR4Q5NUL3 377 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 MINOS1Q5TGZ0 78 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 PVRIGQ6DKI7 326 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 LCN15Q6UWW0 184 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 TMEM219Q86XT9 240 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 TGIF2LXQ8IUE1 241 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.81□□□□□ -1.32
HDAC1-202ENST00000428704 TEX45Q8NA69 505 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 WFDC9Q8NEX5 89 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 RXFP4Q8TDU9 374 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 TXNDC17Q9BRA2 123 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 PLEKHA3Q9HB20 300 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 MANBALQ9NQG1 85 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 HILPDAQ9Y5L2 63 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 MINOS1-NBL1R4GNA1 71 aa6.81□□□□□ -1.32
HDAC1-202ENST00000428704 SMCO3A2RU48 225 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 H3BQ15 152 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 NUPL2O15504 423 aaKnown RBP6.8□□□□□ -1.32
HDAC1-202ENST00000428704 CA2P00918 260 aa6.8□□□□□ -1.32
HDAC1-202ENST00000428704 CRYGBP07316 175 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms