RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 LINC00696Q6ZRV3 163 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 SRRM4A7MD48 611 aaKnown RBP13.06□□□□□ -0.32
C9orf3-206ENST00000428313 PRR33A8MZF0 331 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 LMO7DNF2Z398 122 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 ZNHIT1O43257 154 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 WDR86Q86TI4 376 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 RPRMLQ8N4K4 120 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 TTC9CQ8N5M4 171 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-206ENST00000428313 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 CNTRLQ7Z7A1 2325 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 C19orf71A6NCJ1 209 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 LINC01565O15544 149 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF137PP52743 207 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 GPR82Q96P67 336 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 MLST8Q9BVC4 326 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 JPT1Q9UK76 154 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 KLF12Q9Y4X4 402 aa13.06□□□□□ -0.32
C9orf3-206ENST00000428313 IGKV1OR2-108A0A075B7D4 117 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 E9PLD3 99 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 P01737 135 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 CELA3AP09093 270 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 TMEM14BQ9NUH8 114 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 MKI67P46013 3256 aaKnown RBP13.05□□□□□ -0.32
C9orf3-206ENST00000428313 A0A096LPE4 126 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 A0A1W2PPZ6 126 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 A0A1W2PR77 199 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 ATP5IP56385 69 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-206ENST00000428313 ACP7Q6ZNF0 438 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 PIFOQ8TCI5 191 aa13.05□□□□□ -0.32
C9orf3-206ENST00000428313 TIMM8BQ9Y5J9 83 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-206ENST00000428313 PROP1O75360 226 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 CSN3P07498 182 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 MYCNOSP40205 109 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 COQ2Q96H96 371 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 FBLL1A6NHQ2 334 aaKnown RBP13.04□□□□□ -0.32
C9orf3-206ENST00000428313 CR1LQ2VPA4 569 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 LCNL1Q6ZST4 164 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
C9orf3-206ENST00000428313 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 IGHV3-9P01782 118 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 IGHV3-43DP0DP04 118 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 CD27P26842 260 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 PLP2Q04941 152 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 C8orf86Q6ZUL3 223 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 C18orf15Q96N68 181 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 S1PR3Q99500 378 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 KLF13Q9Y2Y9 288 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-206ENST00000428313 SZT2Q5T011 3432 aa13.03□□□□□ -0.32
C9orf3-206ENST00000428313 TRAV5A0A0B4J249 113 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF503-AS2A6NEH8 195 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 MRPL33O75394 65 aaKnown RBP13.02□□□□□ -0.32
C9orf3-206ENST00000428313 FXYD2P54710 66 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 TMEM177Q53S58 311 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 ZNF766Q5HY98 468 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 BCL6BQ8N143 479 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-206ENST00000428313 OR8A1Q8NGG7 326 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 EPDR1Q9UM22 224 aa13.02□□□□□ -0.32
C9orf3-206ENST00000428313 NKX2-8O15522 239 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 SPINT2O43291 252 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 GCSHP23434 173 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 CEBPDP49716 269 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-206ENST00000428313 ETDBQ3ZM63 59 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 PCP2Q8IVA1 136 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
C9orf3-206ENST00000428313 hADV38S2A0JD32 116 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 DEFB108AA8MXU0 73 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 KLK10O43240 276 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 SSR4P51571 173 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 MORN5Q5VZ52 161 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 LINC00322Q6ZN03 302 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-206ENST00000428313 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
C9orf3-206ENST00000428313 OR5AN1Q8NGI8 311 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 LINC00312Q9Y6C7 94 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 ASCC3Q8N3C0 2202 aaKnown RBP13.01□□□□□ -0.33
C9orf3-206ENST00000428313 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 A0A096LNJ9 63 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 TCRBV4S1A1TA0A5B7 111 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 CYB561P49447 251 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 SH2D6Q7Z4S9 175 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 PRR7Q8TB68 274 aa13.01□□□□□ -0.33
C9orf3-206ENST00000428313 C15orf65H3BRN8 121 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 LAMTOR5O43504 91 aa13□□□□□ -0.33
C9orf3-206ENST00000428313 LTAP01374 205 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms