RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1
TCOF1-204ENST00000427724 SAPCD1Q5SSQ6 148 aa8.77□□□□□ -1
TCOF1-204ENST00000427724 TMEM170AQ8WVE7 144 aa8.77□□□□□ -1
TCOF1-204ENST00000427724 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1
TCOF1-204ENST00000427724 CD1BP29016 333 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 SAA4P35542 130 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 ZNF324BQ6AW86 544 aaPredicted RBP8.77□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 QTRT1Q9BXR0 403 aaKnown RBP8.77□□□□□ -1.01
TCOF1-204ENST00000427724 F5H697 171 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 BMPR1BO00238 502 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 CD55P08174 381 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 GATA3P23771 443 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM30BQ3MIR4 351 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 TECRQ9NZ01 308 aaKnown RBP8.77□□□□□ -1.01
TCOF1-204ENST00000427724 FBXL7Q9UJT9 491 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
TCOF1-204ENST00000427724 MLNRO43193 412 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 RND2P52198 227 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
TCOF1-204ENST00000427724 SLC45A2Q9UMX9 530 aa8.77□□□□□ -1.01
TCOF1-204ENST00000427724 CHD3Q12873 2000 aaKnown RBP8.76□□□□□ -1.01
TCOF1-204ENST00000427724 SMIM17P0DL12 118 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 RELQ04864 619 aaPredicted RBP8.76□□□□□ -1.01
TCOF1-204ENST00000427724 FAM169BQ8N8A8 192 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 CHEK1O14757 476 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 PDE6DO43924 150 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 UBE2L3P68036 154 aaKnown RBP8.76□□□□□ -1.01
TCOF1-204ENST00000427724 RSPO1Q2MKA7 263 aaPredicted RBP8.76□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM155Q4W5P6 130 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM200BQ69YZ2 307 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 ARPC1AQ92747 370 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 C16orf92Q96LL3 132 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 RNF114Q9Y508 228 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 IGHV4-61A0A0C4DH41 118 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 SAP30O75446 220 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 SERF1AO75920 110 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 SLC25A5P05141 298 aaKnown RBP8.76□□□□□ -1.01
TCOF1-204ENST00000427724 TCTAP57738 103 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 C1orf194Q5T5A4 169 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 WDR73Q6P4I2 378 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 SELENOKQ9Y6D0 94 aa8.76□□□□□ -1.01
TCOF1-204ENST00000427724 TRAV24A0A0B4J272 114 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 NBR2O15453 112 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 HTN3P15516 51 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 GPR183P32249 361 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 NTF4P34130 210 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 DLX1P56177 255 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 MIC13Q5XKP0 118 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 DDB2Q92466 427 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 ANAPC10Q9UM13 185 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 LAMTOR2Q9Y2Q5 125 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 A0A1B0GUS0 222 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 A0A1B0GWJ7 208 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 C17orf98A8MV24 154 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 CSN3P07498 182 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 LYPD6Q86Y78 171 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 OR51G1Q8NGK1 321 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 PSMG3Q9BT73 122 aaPredicted RBP8.75□□□□□ -1.01
TCOF1-204ENST00000427724 PRRC2CQ9Y520 2896 aaKnown RBP8.75□□□□□ -1.01
TCOF1-204ENST00000427724 IGHV3-66A0A0C4DH42 116 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM250H0YL14 139 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 NPPCP23582 126 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 TEPPQ6URK8 271 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 ST6GALNAC6Q969X2 333 aa8.75□□□□□ -1.01
TCOF1-204ENST00000427724 IGHV2-26A0A0B4J1V2 119 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 SLC17A3O00476 420 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 LINC00614P0C842 121 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 TFF3Q07654 80 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 FAM216AQ8WUB2 273 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 TBL2Q9Y4P3 447 aaKnown RBP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 PXMP4Q9Y6I8 212 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 IGHV1-8P0DP01 117 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 SRIP30626 198 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 RRN3P1Q2M238 152 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 FCER1GP30273 86 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 FCGR2BP31994 310 aaPredicted RBP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 AARDQ4LEZ3 155 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 FAM19A2Q8N3H0 131 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 KLHL30-AS1Q8NEE0 82 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 GSX1Q9H4S2 264 aaPredicted RBP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 CFAP54Q96N23 3096 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 ETV2O00321 342 aaPredicted RBP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 HSPE1P61604 102 aaKnown RBP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 SRSF7Q16629 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
TCOF1-204ENST00000427724 NMSQ5H8A3 153 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 LDLRAD2Q5SZI1 272 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 RNF2Q99496 336 aa8.74□□□□□ -1.01
TCOF1-204ENST00000427724 A0A0G2JRQ6 117 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 PSPNO60542 156 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 EMP1P54849 157 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 TMEM42Q69YG0 159 aa8.73□□□□□ -1.01
TCOF1-204ENST00000427724 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms