RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 C2orf83Q53S99 150 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 PSMG4Q5JS54 123 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 ZNF705AQ6ZN79 300 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-209ENST00000425239 OR52I2Q8NH67 350 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 TERB2Q8NHR7 220 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 GLYATL2Q8WU03 294 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 ABHD1Q96SE0 405 aa10.72□□□□□ -0.69
ATG4B-209ENST00000425239 SEPSECSQ9HD40 501 aaKnown RBP10.72□□□□□ -0.69
ATG4B-209ENST00000425239 HELTA6NFD8 242 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 FAM90A26D6RGX4 464 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 CD74P04233 296 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 HOXA1P49639 335 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-209ENST00000425239 AP2S1P53680 142 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-209ENST00000425239 SPCS3P61009 180 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 VBP1P61758 197 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 OR1S2Q8NGQ3 325 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 RTBDNQ9BSG5 229 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-209ENST00000425239 FUNDC2Q9BWH2 189 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
ATG4B-209ENST00000425239 ZNF705FA8MVS1 300 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-209ENST00000425239 ATG12O94817 140 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.77e-14■■□□□ 12
ATG4B-209ENST00000425239 ZNF705DP0CH99 300 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-209ENST00000425239 ZNF705BP0CI00 300 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-209ENST00000425239 P0DMU3 169 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 FAM231AP0DMU4 169 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 FAM231CP0DMU5 169 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 HTR2BP41595 481 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 RND2P52198 227 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 LGALS9BQ3B8N2 356 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 RNASE10Q5GAN6 216 aaKnown RBP10.7□□□□□ -0.7
ATG4B-209ENST00000425239 GDF5OSQ5U4N7 250 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 Q6ZR54 194 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 OR13C8Q8NGS7 320 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 Q8WTZ3 238 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 NEU1Q99519 415 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 PDCD10Q9BUL8 212 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
ATG4B-209ENST00000425239 A0A087WXM4 84 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 PRSS29PA6NIE9 313 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 OR10J1P30954 320 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 DEFB1P60022 68 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 RNASE12Q5GAN4 147 aaKnown RBP10.69□□□□□ -0.7
ATG4B-209ENST00000425239 FAM219AQ8IW50 185 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 SELENOHQ8IZQ5 122 aaKnown RBP10.69□□□□□ -0.7
ATG4B-209ENST00000425239 ZFAND1Q8TCF1 268 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 MARCH1Q8TCQ1 289 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 RNASEH2CQ8TDP1 164 aaKnown RBP10.69□□□□□ -0.7
ATG4B-209ENST00000425239 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 RRNAD1Q96FB5 475 aaKnown RBP10.69□□□□□ -0.7
ATG4B-209ENST00000425239 KRTAP4-5Q9BYR2 181 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 NRN1Q9NPD7 142 aa10.69□□□□□ -0.7
ATG4B-209ENST00000425239 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-209ENST00000425239 TEX13DA0A0J9YY54 714 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-209ENST00000425239 M0R2N4 97 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 B3GALNT1O75752 331 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 OR5AC1P0C628 307 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 SLC25A4P12235 298 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 HLA-DRB4P13762 266 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 TBPP20226 339 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 TRIM16LQ309B1 348 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 TMEM229BQ8NBD8 167 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 NDUFAF3Q9BU61 184 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 C1QTNF4Q9BXJ3 329 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 ENY2Q9NPA8 101 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 COPZ2Q9P299 210 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 HLA-DRB4X5D2U9 266 aa10.68□□□□□ -0.7
ATG4B-209ENST00000425239 APOBP04114 4563 aaKnown RBP10.67□□□□□ -0.7
ATG4B-209ENST00000425239 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 IL4P05112 153 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 NKX2-1P43699 371 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-209ENST00000425239 EIF2B2P49770 351 aaKnown RBP10.67□□□□□ -0.7
ATG4B-209ENST00000425239 RORCP51449 518 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 CTF1Q16619 201 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 NMSQ5H8A3 153 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 ZNF709Q8N972 641 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
ATG4B-209ENST00000425239 NARS2Q96I59 477 aaKnown RBP10.67□□□□□ -0.7
ATG4B-209ENST00000425239 HEYLQ9NQ87 328 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-209ENST00000425239 TOMM40O96008 361 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 PSG1P11464 419 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 NUTF2P61970 127 aaKnown RBP10.66□□□□□ -0.7
ATG4B-209ENST00000425239 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
ATG4B-209ENST00000425239 MEF2DQ14814 521 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 SIGLEC15Q6ZMC9 328 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 CCDC71LQ8N9Z2 235 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 SLC24A4Q8NFF2 622 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 RBPMSQ93062 196 aaKnown RBP10.66□□□□□ -0.7
ATG4B-209ENST00000425239 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 WDR12Q9GZL7 423 aaKnown RBP10.66□□□□□ -0.7
ATG4B-209ENST00000425239 NAA50Q9GZZ1 169 aaKnown RBP10.66□□□□□ -0.7
ATG4B-209ENST00000425239 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 PLA2G2EQ9NZK7 142 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 GPR132Q9UNW8 380 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 TMEM56-RWDD3S4R434 201 aa10.66□□□□□ -0.7
ATG4B-209ENST00000425239 SOCS3O14543 225 aa10.65□□□□□ -0.7
ATG4B-209ENST00000425239 SCGB2A1O75556 95 aa10.65□□□□□ -0.7
ATG4B-209ENST00000425239 RAB3DO95716 219 aa10.65□□□□□ -0.7
ATG4B-209ENST00000425239 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms