RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 Q8WTZ3 238 aa11.8□□□□□ -0.52
CHCHD3-202ENST00000423635 IGHV3OR16-12A0A075B7B8 117 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 BUB3O43684 328 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 TMEM127O75204 238 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 P0C879 139 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 BSXQ3C1V8 233 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 GDF5OSQ5U4N7 250 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 ATG101Q9BSB4 218 aa11.79□□□□□ -0.52
CHCHD3-202ENST00000423635 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 IGLC1P0CG04 106 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 UCP3P55916 312 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 SPATA12Q7Z6I5 190 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 ZNF709Q8N972 641 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 OR1S2Q8NGQ3 325 aa11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 S100A16Q96FQ6 103 aaKnown RBP11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
CHCHD3-202ENST00000423635 HRH1P35367 487 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 ETV6P41212 452 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 FXYD7P58549 80 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 TAS2R20P59543 309 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 DHODHQ02127 395 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 USF2Q15853 346 aaPredicted RBP11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 SIGLEC15Q6ZMC9 328 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 C1orf158Q8N1D5 194 aa11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 SAV1Q9H4B6 383 aaPredicted RBP11.77□□□□□ -0.53
CHCHD3-202ENST00000423635 IGKV3-20P01619 116 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 HBE1P02100 147 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 PSMB9P28065 219 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 DAD1P61803 113 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 GSG1LQ6UXU4 331 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 PDCD10Q9BUL8 212 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
CHCHD3-202ENST00000423635 LOC102723971A0A1B0GUV8 181 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 HSPA13P48723 471 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 DEFB1P60022 68 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 GABARAPL2P60520 117 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 TSPAN5P62079 268 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 PRSS54Q6PEW0 395 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 FOXI2Q6ZQN5 318 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 SPARTQ8N0X7 666 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 ENY2Q9NPA8 101 aa11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
CHCHD3-202ENST00000423635 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 IL4P05112 153 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 OR10J1P30954 320 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 ZNF79Q15937 498 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 RRN3P1Q2M238 152 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
CHCHD3-202ENST00000423635 ATG12O94817 140 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 SLC25A4P12235 298 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 PRSS3P35030 304 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 RND3P61587 244 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 PSG9Q00887 426 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 TMEM69Q5SWH9 247 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 SLC35B3Q9H1N7 401 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 SCPEP1Q9HB40 452 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 FAT1Q14517 4588 aa11.73□□□□□ -0.53
CHCHD3-202ENST00000423635 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 HTR2BP41595 481 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 RND2P52198 227 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 PAX9P55771 341 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 CCL18P55774 89 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 KRTAP10-2P60368 255 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 C7orf50Q9BRJ6 194 aaKnown RBP11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 KLK11Q9UBX7 282 aa11.72□□□□□ -0.53
CHCHD3-202ENST00000423635 TOMM40O96008 361 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 RD3LP0DJH9 198 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 ID1P41134 155 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 AKR1C2P52895 323 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 AARDQ4LEZ3 155 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 UBE2NLQ5JXB2 153 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 TP53RKQ96S44 253 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 WDR12Q9GZL7 423 aaKnown RBP11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 LINC00588Q9Y4M8 146 aa11.71□□□□□ -0.53
CHCHD3-202ENST00000423635 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 SOCS3O14543 225 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 PSMB3P49720 205 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 SPCS3P61009 180 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 C2orf83Q53S99 150 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 OR52E5Q8NH55 327 aa11.7□□□□□ -0.54
CHCHD3-202ENST00000423635 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 LOC100506127A0A0U1RQW1 187 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 NXPH3O95157 252 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 INAFM2P0DMQ5 153 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 RORCP51449 518 aa11.69□□□□□ -0.54
CHCHD3-202ENST00000423635 FAM78BQ5VT40 261 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms