RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 A8MWL6 223 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 H0Y8G0 127 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 TIMM8AO60220 97 aaPredicted RBP8.66□□□□□ -1.02
USP54-204ENST00000422491 HTR1DP28221 377 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 C17orf58Q2M2W7 97 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 PGLYRP4Q96LB8 373 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 SGK494Q96LW2 274 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 GPR82Q96P67 336 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
USP54-204ENST00000422491 FZR1Q9UM11 496 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 EPDR1Q9UM22 224 aa8.66□□□□□ -1.02
USP54-204ENST00000422491 C9orf118A6NHY6 69 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 COX7A2P2O60397 106 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 LYZL6O75951 148 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 FGF6P10767 208 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 GTF2H5Q6ZYL4 71 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 CACNG8Q8WXS5 425 aa8.65□□□□□ -1.02
USP54-204ENST00000422491 SRRM5B3KS81 715 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 SNAI2O43623 268 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 MOSP00540 346 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 IGKV1-16P04430 117 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 ZNF137PP52743 207 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 ABHD17BQ5VST6 288 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 C10orf113Q5VZT2 155 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 NEGR1Q7Z3B1 354 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 OR10W1Q8NGF6 305 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 NEU4Q8WWR8 484 aaPredicted RBP8.65□□□□□ -1.03
USP54-204ENST00000422491 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.03
USP54-204ENST00000422491 H3BRM9 83 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 K7EP34 96 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 INO80CQ6PI98 192 aaPredicted RBP8.64□□□□□ -1.03
USP54-204ENST00000422491 LINC00696Q6ZRV3 163 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
USP54-204ENST00000422491 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 GFRA4Q9GZZ7 299 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
USP54-204ENST00000422491 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 C5orf17Q8NAS9 161 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 OR1L4Q8NGR5 311 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 PPP1R35Q8TAP8 253 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 ITLN1Q8WWA0 313 aa8.64□□□□□ -1.03
USP54-204ENST00000422491 IGHV3OR15-7A0A075B7D8 119 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 DLL1O00548 723 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 IGKV3-15P01624 115 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 P01737 135 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 APOA2P02652 100 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
USP54-204ENST00000422491 SLC25A5P05141 298 aaKnown RBP8.63□□□□□ -1.03
USP54-204ENST00000422491 FABP6P51161 128 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 TMEM177Q53S58 311 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 ZNF747Q9BV97 191 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 IGKV1D-37A0A075B6S9 117 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 OVOL3O00110 214 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 NCR2O95944 276 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 LTAP01374 205 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 FAM87AP0C7U9 286 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 UQCRFS1P47985 274 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 PDPNQ86YL7 162 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 TEX45Q8NA69 505 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 DMDP11532 3685 aa8.63□□□□□ -1.03
USP54-204ENST00000422491 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 CHEK1O14757 476 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 SAA1P0DJI8 122 aaPredicted RBP8.62□□□□□ -1.03
USP54-204ENST00000422491 CXCL12P48061 93 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 C6orf15Q6UXA7 325 aaPredicted RBP8.62□□□□□ -1.03
USP54-204ENST00000422491 GCSAMQ8N6F7 178 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 DPF1Q92782 380 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 RABAC1Q9UI14 185 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 PRR14LQ5THK1 2151 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 KBTBD11-OT1A0A1B0GTJ5 212 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 TCRBV4S1A1TA0A5B7 111 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 PGPA6NDG6 321 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 H3BUT2 72 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 HAX1O00165 279 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 AGFG2O95081 481 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 PLAUP00749 431 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 CT45A6P0DMU7 189 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 CT45A5P0DMU8 189 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 CT45A7P0DMV0 189 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 MEOX1P50221 254 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 OR2Z1Q8NG97 314 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 NDUFA4L2Q9NRX3 87 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 SPRR3Q9UBC9 169 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 PILRBQ9UKJ0 227 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 DSCAML1Q8TD84 2053 aa8.62□□□□□ -1.03
USP54-204ENST00000422491 A6NDN8 102 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 PCNX2A6NKB5 2137 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 LINC00305Q7Z4B0 112 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 PIP4P2Q8N4L2 257 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.61□□□□□ -1.03
USP54-204ENST00000422491 CSN3P07498 182 aa8.61□□□□□ -1.03
USP54-204ENST00000422491 CD46P15529 392 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms