RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 EPDR1Q9UM22 224 aa0.9□□□□□ -2.27
LINC00397-201ENST00000422074 PRELID3BQ9Y3B1 194 aa0.9□□□□□ -2.27
LINC00397-201ENST00000422074 COL4A5P29400 1685 aa0.9□□□□□ -2.27
LINC00397-201ENST00000422074 MYO3BQ8WXR4 1341 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 MED1Q15648 1581 aaPredicted RBP0.89□□□□□ -2.27
LINC00397-201ENST00000422074 A0A087WUJ7 227 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 C7orf71A4D174 169 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 CYB5BO43169 146 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 SERPINE1P05121 402 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 C8GP07360 202 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 AP3S2P59780 193 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 LSM6P62312 80 aaKnown RBP0.89□□□□□ -2.27
LINC00397-201ENST00000422074 PDE6HQ13956 83 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 LYRM7Q5U5X0 104 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 FAM19A2Q8N3H0 131 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 LINC00301Q8NCQ3 95 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 OR52R1Q8NGF1 315 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 OR13D1Q8NGV5 346 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 OR2T10Q8NGZ9 312 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 SLC25A40Q8TBP6 338 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 FAM172AQ8WUF8 416 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 C2orf50Q96LR7 162 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 KIFC1Q9BW19 673 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 C6orf62Q9GZU0 229 aaPredicted RBP0.89□□□□□ -2.27
LINC00397-201ENST00000422074 RASL12Q9NYN1 266 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 TVP23BQ9NYZ1 205 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 MED13Q9UHV7 2174 aa0.89□□□□□ -2.27
LINC00397-201ENST00000422074 RTTNQ86VV8 2226 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.88□□□□□ -2.27
LINC00397-201ENST00000422074 TRBV6-8A0A0A6YYG3 113 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 ZNF682O95780 498 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 DEFA3P59666 94 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 BRMS1LQ5PSV4 323 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 OR8D4Q8NGM9 314 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 TEX47Q8TBZ9 253 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 ACER3Q9NUN7 267 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 FBXO5Q9UKT4 447 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 SLC22A13Q9Y226 551 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 HS3ST2Q9Y278 367 aa0.88□□□□□ -2.27
LINC00397-201ENST00000422074 TAF1LQ8IZX4 1826 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 TRAV12-1A0A0B4J245 112 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 C19orf84I3L1E1 186 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 TSNQ15631 228 aaKnown RBP0.87□□□□□ -2.27
LINC00397-201ENST00000422074 LIN52Q52LA3 116 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 Q8N814 137 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 OR10J5Q8NHC4 309 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 ITFG2Q969R8 447 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 OBSCN-AS1Q96MR7 158 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 SIGMAR1Q99720 223 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 UQCC1Q9NVA1 299 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 UTP11Q9Y3A2 253 aaKnown RBP0.87□□□□□ -2.27
LINC00397-201ENST00000422074 FREM1Q5H8C1 2179 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
LINC00397-201ENST00000422074 MICAL3Q7RTP6 2002 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 BAZ2BQ9UIF8 2168 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 DLG5Q8TDM6 1919 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 CCDC160A6NGH7 325 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 E2F6O75461 281 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 LYZL6O75951 148 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ERP29P30040 261 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 SRP14P37108 136 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 EIF5AP63241 154 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 CTAG1AP78358 180 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ESRGQ1W209 222 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 Q6Q795 121 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 LCA10Q71F78 164 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 OR52L1Q8NGH7 329 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ZNF418Q8TF45 676 aaPredicted RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 C4orf3Q8WVX3 66 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 LINC00526Q96FQ7 95 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 RNASE7Q9H1E1 156 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 UCK1Q9HA47 277 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 NMNAT1Q9HAN9 279 aaPredicted RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 C14orf132Q9NPU4 83 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 IDI2-AS1Q9NZ38 188 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ZFP30Q9Y2G7 519 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ARL2BPQ9Y2Y0 163 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 FAM32AQ9Y421 112 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 TNRC6BQ9UPQ9 1833 aaKnown RBP0.86□□□□□ -2.27
LINC00397-201ENST00000422074 CCDC144AA2RUR9 1427 aa0.86□□□□□ -2.27
LINC00397-201ENST00000422074 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
LINC00397-201ENST00000422074 LOC110117498A0A087WWA1 95 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 CLDN25C9JDP6 229 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 CCL7P80098 99 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 TEX261Q6UWH6 196 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 CLECL1Q8IZS7 167 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 WFDC5Q8TCV5 224 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 GNPDA2Q8TDQ7 276 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 TLNRD1Q9H1K6 362 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 ENY2Q9NPA8 101 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 U3KQ87 197 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 SDK1Q7Z5N4 2213 aa0.85□□□□□ -2.27
LINC00397-201ENST00000422074 INTS1Q8N201 2190 aaKnown RBP0.84□□□□□ -2.27
LINC00397-201ENST00000422074 ZNF106Q9H2Y7 1883 aaKnown RBP0.84□□□□□ -2.27
LINC00397-201ENST00000422074 ZFYVE9O95405 1425 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 OR7C1O76099 320 aaPredicted RBP0.84□□□□□ -2.27
LINC00397-201ENST00000422074 HAND1O96004 215 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 REEP5Q00765 189 aa0.84□□□□□ -2.27
LINC00397-201ENST00000422074 KRR1Q13601 381 aaKnown RBP0.84□□□□□ -2.27
LINC00397-201ENST00000422074 AKIRIN2Q53H80 203 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms