RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 RPRMQ9NS64 109 aa10.34□□□□□ -0.75
HLA-DMB-258ENST00000418107 ZNF355PQ9NSJ1 428 aa10.34□□□□□ -0.75
HLA-DMB-258ENST00000418107 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
HLA-DMB-258ENST00000418107 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
HLA-DMB-258ENST00000418107 ZFP92A6NM28 416 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 NUDT19A8MXV4 375 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 ATP6V0E1O15342 81 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 IGHV4-59P01825 116 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 HBE1P02100 147 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 FAM122CQ6P4D5 195 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 OR10G4Q8NGN3 311 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 OR10G9Q8NGN4 311 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 OR10G7Q8NGN6 311 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 SFT2D1Q8WV19 159 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 TMEM68Q96MH6 324 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 SLC39A9Q9NUM3 307 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 THYN1Q9P016 225 aa10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 LSM4Q9Y4Z0 139 aaKnown RBP10.33□□□□□ -0.76
HLA-DMB-258ENST00000418107 CRYGCP07315 174 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 S100A1P23297 94 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 IER3P46695 156 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 PROK1P58294 105 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 B2MP61769 119 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 ASPHD1Q5U4P2 390 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 SLC35E3Q7Z769 313 aa10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 ACTR3CQ9C0K3 210 aaPredicted RBP10.32□□□□□ -0.76
HLA-DMB-258ENST00000418107 A0A1W2PPV4 95 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 HIST1H1BP16401 226 aaKnown RBP10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 M6PRP20645 277 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 RPL29P47914 159 aaKnown RBP10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 RPL15P61313 204 aaKnown RBP10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 CYP2G1PQ6ZSU1 146 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 STPG3Q8N7X2 389 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 BPIFCQ8NFQ6 507 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 SLC45A2Q9UMX9 530 aa10.31□□□□□ -0.76
HLA-DMB-258ENST00000418107 TRAV41A0A0B4J266 112 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 RAB19A4D1S5 217 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 MFSD2BA6NFX1 497 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 I3L521 148 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 AMY1AP04745 511 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 COMMD1Q8N668 190 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 THAP8Q8NA92 274 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 RCC1LQ96I51 464 aaKnown RBP10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 SLC25A22Q9H936 323 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 DMRT1Q9Y5R6 373 aa10.3□□□□□ -0.76
HLA-DMB-258ENST00000418107 KMT2CQ8NEZ4 4911 aaKnown RBP10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 MAP1LC3B2A6NCE7 125 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 G3V318 75 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 I3L2K1 104 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 OR2J3O76001 311 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 CDC34P49427 236 aaPredicted RBP10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 MFAP4P55083 255 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 SELENOTP62341 195 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 Q6ZSV7 163 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 IQCF2Q8IXL9 164 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 NARS2Q96I59 477 aaKnown RBP10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 MAP1LC3BQ9GZQ8 125 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 TREM1Q9NP99 234 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 LINC00527Q9UJ94 153 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 VPREB3Q9UKI3 123 aa10.29□□□□□ -0.76
HLA-DMB-258ENST00000418107 IGKV1OR2-108A0A075B7D4 117 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 K7EIM0 57 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 SCGB2A1O75556 95 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 YIF1AO95070 293 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 IGHG2P01859 326 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 FABP1P07148 127 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 GATA2P23769 480 aaPredicted RBP10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 NPBWR1P48145 328 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 FGF8P55075 233 aaPredicted RBP10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 RHOBP62745 196 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 BLCAPP62952 87 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 Q56UQ5 140 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 GCSAMLQ5JQS6 135 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 TMEM116Q8NCL8 245 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 OR4X1Q8NH49 305 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 MBD3L1Q8WWY6 194 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 TRGV9Q99603 122 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 PBDC1Q9BVG4 233 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 EIF5A2Q9GZV4 153 aaKnown RBP10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 S4R3C0 116 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 NBEAL2Q6ZNJ1 2754 aa10.28□□□□□ -0.76
HLA-DMB-258ENST00000418107 G3V4G9 280 aa10.27□□□□□ -0.76
HLA-DMB-258ENST00000418107 AP4M1O00189 453 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms