RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 C1orf137Q5JT78 98 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 TEX36Q5VZQ5 186 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 KRTAP26-1Q6PEX3 210 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 Q6Q795 121 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 DEFB128Q7Z7B8 93 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 OR6V1Q8N148 313 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 HIST3H2BBQ8N257 126 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 Q8N6K4 173 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 GDPD1Q8N9F7 314 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 OR10J5Q8NHC4 309 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 CT55Q8WUE5 264 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 ITFG2Q969R8 447 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 SLAMF6Q96DU3 332 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 ZC2HC1AQ96GY0 325 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 SCGB3A1Q96QR1 104 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 KRTAP2-4Q9BYR9 128 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 KRTAP2-1Q9BYU5 128 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 ULBP3Q9BZM4 244 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 TMEM126AQ9H061 195 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 OR51V1Q9H2C8 321 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 TRABDQ9H4I3 376 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 FAM96AQ9H5X1 160 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 SLC39A9Q9NUM3 307 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 SLC22A13Q9Y226 551 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 UTP11Q9Y3A2 253 aaKnown RBP0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 ASB4Q9Y574 426 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 PTPRSQ13332 1948 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 GREB1Q4ZG55 1949 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 UNC13CQ8NB66 2214 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 ADGRB2O60241 1585 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 MYH11P35749 1972 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 PCDH15Q96QU1 1955 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 RALGAPA2Q2PPJ7 1873 aa0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 COL1A1P02452 1464 aaPredicted RBP0.1□□□□□ -2.39
TRAPPC13-203ENST00000415825 MAST2Q6P0Q8 1798 aa0.09□□□□□ -2.39
TRAPPC13-203ENST00000415825 FSIP2Q5CZC0 6907 aa0.09□□□□□ -2.39
TRAPPC13-203ENST00000415825 TOPBP1Q92547 1522 aa0.09□□□□□ -2.39
TRAPPC13-203ENST00000415825 TRBV6-7A0A0A0MS04 114 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRAV4A0A0B4J268 109 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 A0A1B0GV50 99 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 C1orf196B1AJZ1 125 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM114B3SHH9 223 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 M0R378 163 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 INE1O15225 51 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 CCL25O15444 150 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 PDE6DO43924 150 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 KLF7O75840 302 aaPredicted RBP0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 PIAS1O75925 651 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 RPP14O95059 124 aaKnown RBP0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 GADD45GO95257 159 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGLV1-51P01701 117 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 COX6A1P12074 109 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 HOXA6P31267 233 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 BRS3P32247 399 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OMPP47874 163 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 ATP5G3P48201 142 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 ROMO1P60602 79 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 DYNLT1P63172 113 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 RHOGP84095 191 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 EDDM3AQ14507 147 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 NDUFA5Q16718 116 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 ESRGQ1W209 222 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 RGS21Q2M5E4 152 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM97Q5BJF2 176 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 BRMS1LQ5PSV4 323 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 DPPA3Q6W0C5 159 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 SOSTDC1Q6X4U4 206 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OOSP2Q86WS3 158 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 PHF13Q86YI8 300 aaPredicted RBP0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 SBSPONQ8IVN8 264 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 PDZD9Q8IXQ8 264 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 CLECL1Q8IZS7 167 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 Q8N814 137 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 C12orf29Q8N999 325 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR4E2Q8NGC2 313 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR11H6Q8NGC7 330 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR4D11Q8NGI4 311 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR51A2Q8NGJ7 313 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR4C6Q8NH72 309 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 Q8TAT8 98 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 SFT2D1Q8WV19 159 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 GPR146Q96CH1 333 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 DCUN1D1Q96GG9 259 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 CARD19Q96LW7 228 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 SERPINI1Q99574 410 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 SIGMAR1Q99720 223 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 GINS4Q9BRT9 223 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 KIFC1Q9BW19 673 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TLNRD1Q9H1K6 362 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 MIXL1Q9H2W2 232 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 BCL2L10Q9HD36 194 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 CDC42SE1Q9NRR8 79 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAS2R4Q9NYW5 299 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 GLTPQ9NZD2 209 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR5AC2Q9NZP5 309 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 FBXO5Q9UKT4 447 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 HS3ST2Q9Y278 367 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 PIK3C2GO75747 1445 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 CNTRLQ7Z7A1 2325 aa0.09□□□□□ -2.4
TRAPPC13-203ENST00000415825 TET1Q8NFU7 2136 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms