RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 SIGLECL1Q8N7X8 197 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 PXT1Q8NFP0 134 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 OR4E2Q8NGC2 313 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 GINS4Q9BRT9 223 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 C9orf16Q9BUW7 83 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 KIFC1Q9BW19 673 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 RNF122Q9H9V4 155 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 SLC39A9Q9NUM3 307 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 SNURFQ9Y675 71 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 ANAPC1Q9H1A4 1944 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 ZCCHC11Q5TAX3 1644 aaKnown RBP0.71□□□□□ -2.3
ATG4C-204ENST00000414558 ECM29Q5VYK3 1845 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 MICAL3Q7RTP6 2002 aa0.71□□□□□ -2.3
ATG4C-204ENST00000414558 DLG5Q8TDM6 1919 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PBRM1Q86U86 1689 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 IGKV1D-42A0A075B6H8 117 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 IGKV2D-26A0A0A0MRZ7 120 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 FAM236DA0A1B0GTK5 79 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR2T1O43869 369 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PDE6DO43924 150 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR7C1O76099 320 aaPredicted RBP0.7□□□□□ -2.3
ATG4C-204ENST00000414558 BAALC-AS2P0C853 105 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 FAM236CP0DP71 79 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 CRYGAP11844 174 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PPP1R2P41236 205 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 SERPINB9P50453 376 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 POU6F1Q14863 301 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 C12orf74Q32Q52 190 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 KHDC3LQ587J8 217 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PPP1R2P3Q6NXS1 205 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 DHRS4L2Q6PKH6 230 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 TMED4Q7Z7H5 227 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 TRAPPC6BQ86SZ2 158 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 GDPD1Q8N9F7 314 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR52L1Q8NGH7 329 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR5A1Q8NGJ0 315 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR51A2Q8NGJ7 313 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 OR10X1Q8NGY0 326 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 CT55Q8WUE5 264 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 DNAJC9Q8WXX5 260 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 AP3S1Q92572 193 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 CEP19Q96LK0 163 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 C2orf50Q96LR7 162 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PHB2Q99623 299 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 SIGMAR1Q99720 223 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PRRT1Q99946 306 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 SLC50A1Q9BRV3 221 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 ARMC1Q9NVT9 282 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 IDI2-AS1Q9NZ38 188 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PRELID3BQ9Y3B1 194 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 HECW1Q76N89 1606 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 SYNMO15061 1565 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 PLXND1Q9Y4D7 1925 aa0.7□□□□□ -2.3
ATG4C-204ENST00000414558 ADGBQ8N7X0 1667 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 hADV38S2A0JD32 116 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 FAM159BA6NKW6 160 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 GEMIN2O14893 280 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 ZNF682O95780 498 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 CYBAP13498 195 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 SPI1P17947 270 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 S100A4P26447 101 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 BRS3P32247 399 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 YPEL3P61236 119 aaPredicted RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 VBP1P61758 197 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 RPL19P84098 196 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 KRR1Q13601 381 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 TAF1AQ15573 450 aaPredicted RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 LINC01554Q52M75 96 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 HACD4Q5VWC8 232 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 GNPDA2Q8TDQ7 276 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 GPR146Q96CH1 333 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 DGCR14Q96DF8 476 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 ODF3Q96PU9 254 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 CCDC90BQ9GZT6 254 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 NHP2Q9NX24 153 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 TAS2R4Q9NYW5 299 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 OPTCQ9UBM4 332 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 ATPIF1Q9UII2 106 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 CYSLTR1Q9Y271 337 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 FAM32AQ9Y421 112 aaKnown RBP0.69□□□□□ -2.3
ATG4C-204ENST00000414558 V9GYQ6 96 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 MYH7BA7E2Y1 1941 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 MYH2Q9UKX2 1941 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 SBF1O95248 1867 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 DOCK3Q8IZD9 2030 aa0.69□□□□□ -2.3
ATG4C-204ENST00000414558 TNRC6BQ9UPQ9 1833 aaKnown RBP0.68□□□□□ -2.3
ATG4C-204ENST00000414558 NCAPD3P42695 1498 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 MYH3P11055 1940 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 DENND4CQ5VZ89 1909 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 LOC110117498A0A087WWA1 95 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 A0A087WX48 190 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 C2orf70A6NJV1 201 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 TMEM238C9JI98 176 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 J3QRK9 145 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 OR1I1O60431 355 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 ATG12O94817 140 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 IFNA1P01562 189 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 SERPINE1P05121 402 aa0.68□□□□□ -2.3
ATG4C-204ENST00000414558 C8GP07360 202 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms