RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 CTRB1P17538 263 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 DEFB121Q5J5C9 76 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 CTRB2Q6GPI1 263 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 C18orf65Q6ZTR6 163 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 KCNIP2Q9NS61 270 aa13.14□□□□□ -0.31
SCAMP4-204ENST00000414057 K7EIL1 84 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 NMBP08949 121 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 FGF7P21781 194 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 HOXD3P31249 432 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 CFHR3Q02985 330 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 RAB31Q13636 194 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 FAM74A1Q5RGS3 127 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 TTC9CQ8N5M4 171 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 SLC35E1Q96K37 410 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 DNAH3Q8TD57 4116 aa13.13□□□□□ -0.31
SCAMP4-204ENST00000414057 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 REG1AP05451 166 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 KRTAP10-11P60412 298 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 DPPA3Q6W0C5 159 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 C4orf3Q8WVX3 66 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 NPCDR1Q9BY65 106 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
SCAMP4-204ENST00000414057 DEFA4P12838 97 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 PSMB8P28062 276 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 OPRK1P41145 380 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 CRIP2P52943 208 aaPredicted RBP13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 NDPQ00604 133 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 RUNX1Q01196 453 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 AKR1C1Q04828 323 aa13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 LSM4Q9Y4Z0 139 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-204ENST00000414057 MBP02144 154 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 AKIRIN2Q53H80 203 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 AKR1C8PQ5T2L2 129 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 RSG1Q9BU20 258 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 MED9Q9NWA0 146 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 LINC00862A6NCI5 91 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 HIST1H1BP16401 226 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 GAMTQ14353 236 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 KLK9Q2XQG4 91 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 C9orf66Q5T8R8 295 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 TMEM182Q6ZP80 229 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 DUX3Q96PT4 197 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 PARP11Q9NR21 331 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 THYN1Q9P016 225 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
SCAMP4-204ENST00000414057 TRAV41A0A0B4J266 112 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 ATP6V0E1O15342 81 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 PRH1P02810 166 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 APELAP0DMC3 54 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 PPIFP30405 207 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 MFAP2P55001 183 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 LFNGQ8NES3 379 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 MISP3Q96FF7 219 aa13.09□□□□□ -0.31
SCAMP4-204ENST00000414057 CAMLGP49069 296 aa13.08□□□□□ -0.32
SCAMP4-204ENST00000414057 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
SCAMP4-204ENST00000414057 TMEM116Q8NCL8 245 aa13.08□□□□□ -0.32
SCAMP4-204ENST00000414057 FNDC4Q9H6D8 234 aaPredicted RBP13.08□□□□□ -0.32
SCAMP4-204ENST00000414057 RPL29P47914 159 aaKnown RBP13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 TMEM41BQ5BJD5 291 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 UNQ5815/PRO19632Q6UWF5 114 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 OR11H1Q8NG94 326 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 MYOZ3Q8TDC0 251 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 MGST2Q99735 147 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 PLA2G2EQ9NZK7 142 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 PFDN2Q9UHV9 154 aa13.07□□□□□ -0.32
SCAMP4-204ENST00000414057 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 G3V318 75 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 I3L2K1 104 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 AGPAT2O15120 278 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 MT-CO2P00403 227 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 IGLV1-40P01703 118 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 RAB9AP51151 201 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 Q6ZRG5 221 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 THAP8Q8NA92 274 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
SCAMP4-204ENST00000414057 SEC14L6B5MCN3 397 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 INSL3P51460 131 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 SELENOTP62341 195 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 FHL3Q13643 280 aa13.05□□□□□ -0.32
SCAMP4-204ENST00000414057 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms