RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 LRTM2Q8N967 370 aa13.79□□□□□ -0.2
ITGA6-204ENST00000412899 K7EMT4 169 aa13.78□□□□□ -0.2
ITGA6-204ENST00000412899 YIF1AO95070 293 aa13.78□□□□□ -0.2
ITGA6-204ENST00000412899 BTCP35070 178 aa13.78□□□□□ -0.2
ITGA6-204ENST00000412899 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
ITGA6-204ENST00000412899 HSPB7Q9UBY9 170 aa13.78□□□□□ -0.2
ITGA6-204ENST00000412899 C9orf170A2RU37 121 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 PLA2G10O15496 165 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 MLANAQ16655 118 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 C2orf83Q53S99 150 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 SLC24A4Q8NFF2 622 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 DTD1Q8TEA8 209 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
ITGA6-204ENST00000412899 S100ZQ8WXG8 99 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 CCDC32Q9BV29 185 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 RBKSQ9H477 322 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 FNDC4Q9H6D8 234 aaPredicted RBP13.77□□□□□ -0.21
ITGA6-204ENST00000412899 TMED3Q9Y3Q3 217 aa13.77□□□□□ -0.21
ITGA6-204ENST00000412899 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 LYRM1O43325 122 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 IFNA10P01566 189 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 HOXB5P09067 269 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 NOXA1Q86UR1 476 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 APRG1Q8IVJ8 170 aa13.76□□□□□ -0.21
ITGA6-204ENST00000412899 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
ITGA6-204ENST00000412899 RPS10-NUDT3A0A1W2PQS6 291 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 TMEM50AO95807 157 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 OR4E1P0C645 316 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 SLC25A6P12236 298 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 ANXA7P20073 488 aaKnown RBP13.75□□□□□ -0.21
ITGA6-204ENST00000412899 NPY1RP25929 384 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 OR4X1Q8NH49 305 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 RNASEH2CQ8TDP1 164 aaKnown RBP13.75□□□□□ -0.21
ITGA6-204ENST00000412899 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 U3KQ87 197 aa13.75□□□□□ -0.21
ITGA6-204ENST00000412899 PLECQ15149 4684 aaKnown RBP13.75□□□□□ -0.21
ITGA6-204ENST00000412899 ALMS1Q8TCU4 4167 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 PITX3O75364 302 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 TFPI2P48307 235 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 CMC4P56277 68 aaPredicted RBP13.74□□□□□ -0.21
ITGA6-204ENST00000412899 DHRS2Q13268 280 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 GGNBP1Q5YKI7 109 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 COQ8AQ8NI60 647 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 TMEM170AQ8WVE7 144 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 RNF2Q99496 336 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 PTTG2Q9NZH5 202 aa13.74□□□□□ -0.21
ITGA6-204ENST00000412899 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
ITGA6-204ENST00000412899 IGKV3-7A0A075B6H7 116 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 IGHV7-4-1A0A0J9YVY3 117 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 CLN5O75503 358 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 SCGB2A1O75556 95 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 DEDDO75618 318 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 ZNF124Q15973 351 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 LGALS9CQ6DKI2 356 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 TMEM116Q8NCL8 245 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 RARRES2Q99969 163 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
ITGA6-204ENST00000412899 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 TRAV14DV4A0A0A6YYC5 116 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 MPTX1A8MV57 137 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 CHEK1O14757 476 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 ADAP1O75689 374 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 SLC25A4P12235 298 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 ZNF600Q6ZNG1 722 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 GATAD1Q8WUU5 269 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 OR10C1Q96KK4 312 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 C20orf85Q9H1P6 137 aa13.72□□□□□ -0.21
ITGA6-204ENST00000412899 PUS1Q9Y606 427 aaKnown RBP eCLIP13.72□□□□□ -0.21
ITGA6-204ENST00000412899 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 FAM90A26D6RGX4 464 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 MED6O75586 246 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 IFNA21P01568 189 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 TCRBP04435 133 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 IFNA4P05014 189 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
ITGA6-204ENST00000412899 PRSS54Q6PEW0 395 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 GINS3Q9BRX5 216 aa13.71□□□□□ -0.21
ITGA6-204ENST00000412899 WDR12Q9GZL7 423 aaKnown RBP13.71□□□□□ -0.21
ITGA6-204ENST00000412899 IAPPP10997 89 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 RND2P52198 227 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 ZNF846Q147U1 533 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 GBGT1Q8N5D6 347 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 MFFQ9GZY8 342 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 FBXL17Q9UF56 701 aa13.7□□□□□ -0.22
ITGA6-204ENST00000412899 TRAV6A0A075B6T7 132 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 IGHV3OR16-13A0A075B7E8 117 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 IGHV3-74A0A0B4J1X5 117 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 NANOS2P60321 138 aaKnown RBP13.69□□□□□ -0.22
ITGA6-204ENST00000412899 PAFAH1B2P68402 229 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 TIGITQ495A1 244 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
ITGA6-204ENST00000412899 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms