RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PAIP2Q9BPZ3 127 aaKnown RBP1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 CYSTM1Q9H1C7 97 aa1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 NHP2Q9NX24 153 aaKnown RBP1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 KIF1BO60333 1816 aa1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 STRCQ7RTU9 1775 aa1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 ALPK2Q86TB3 2170 aa1.51□□□□□ -2.17
RNU2-28P-201ENST00000410457 MICAL3Q7RTP6 2002 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 CYB5BO43169 146 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 SERPINB9P50453 376 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 ZNF846Q147U1 533 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 FAM172AQ8WUF8 416 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 AP3S1Q92572 193 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 PYCARDQ9ULZ3 195 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
RNU2-28P-201ENST00000410457 MED13Q9UHV7 2174 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 MUC6Q6W4X9 2439 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 IGKV1D-42A0A075B6H8 117 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 C7orf71A4D174 169 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 CLDN25C9JDP6 229 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 FKBP2P26885 142 aaKnown RBP1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 SRIP30626 198 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 PIGPP57054 158 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 DEFA3P59666 94 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 KRR1Q13601 381 aaKnown RBP1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 TMED4Q7Z7H5 227 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 DEFB119Q8N690 84 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 OR8D4Q8NGM9 314 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 OR13D1Q8NGV5 346 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 WFDC5Q8TCV5 224 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 ADAT3Q96EY9 351 aaPredicted RBP1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 IMUPQ9GZP8 106 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 TAS2R4Q9NYW5 299 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 HEATR5BQ9P2D3 2071 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 SETD5Q9C0A6 1442 aa1.49□□□□□ -2.17
RNU2-28P-201ENST00000410457 MED1Q15648 1581 aaPredicted RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 HMGB3O15347 200 aaKnown RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 MRPS14O60783 128 aaKnown RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 IFNA7P01567 189 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 BAALC-AS2P0C853 105 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 MIFP14174 115 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 SPI1P17947 270 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 S100A5P33763 92 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 ATP5G3P48201 142 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 RPL19P84098 196 aaKnown RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 TSNQ15631 228 aaKnown RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 RRN3P1Q2M238 152 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 PHF13Q86YI8 300 aaPredicted RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 SERPINI1Q99574 410 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 MRPL32Q9BYC8 188 aaKnown RBP1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 ARFGEF3Q5TH69 2177 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 COL4A1P02462 1669 aa1.48□□□□□ -2.17
RNU2-28P-201ENST00000410457 DIDO1Q9BTC0 2240 aaKnown RBP1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 IGKV1-9A0A0C4DH69 117 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 TMEM212A6NML5 194 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 C1orf196B1AJZ1 125 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 SULT1B1O43704 296 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 OR2T1O43869 369 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 PRB1P04280 392 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 EIF5AP63241 154 aaKnown RBP1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 POU6F1Q14863 301 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 AQP3Q92482 292 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 PRRT1Q99946 306 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 SLC50A1Q9BRV3 221 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 MED9Q9NWA0 146 aa1.47□□□□□ -2.17
RNU2-28P-201ENST00000410457 ATG12O94817 140 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 IFNA1P01562 189 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 RNASE4P34096 147 aaKnown RBP1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 SRP14P37108 136 aaKnown RBP1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 RHOBP62745 196 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 LYG2Q86SG7 212 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 SLAMF6Q96DU3 332 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 ADAT1Q9BUB4 502 aaKnown RBP1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 OR5AC2Q9NZP5 309 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 PRNDQ9UKY0 176 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 SLC35A3Q9Y2D2 325 aa1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
RNU2-28P-201ENST00000410457 ANAPC1Q9H1A4 1944 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 MYOFQ9NZM1 2061 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 TMEM238C9JI98 176 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 E5RI56 91 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 AIPO00170 330 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 NDUFC2O95298 119 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 NEFHP12036 1026 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 NCALDP61601 193 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 C10orf55Q5SWW7 151 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 C12orf29Q8N999 325 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 YPEL2Q96QA6 119 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 UTP11Q9Y3A2 253 aaKnown RBP1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 SBF1O95248 1867 aa1.45□□□□□ -2.18
RNU2-28P-201ENST00000410457 MYH7BA7E2Y1 1941 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 MIA2Q96PC5 1412 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 TRAV14DV4A0A0A6YYC5 116 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 UBL3O95164 117 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 ASAH2BP0C7U1 165 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 PPP1R2P41236 205 aa1.44□□□□□ -2.18
RNU2-28P-201ENST00000410457 PDE6HQ13956 83 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms