RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 IGHV7-81A0A0B4J1V7 117 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 TGFAP01135 160 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 S100A6P06703 90 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 RPL29P47914 159 aaKnown RBP13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 RAB31Q13636 194 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 ZNF562Q6V9R5 426 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 PIFOQ8TCI5 191 aa13.9□□□□□ -0.18
LRPPRC-203ENST00000409946 ZNF727A8MUV8 499 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 AKR1D1P51857 326 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 CD81P60033 236 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 ELOBQ15370 118 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 KCNIP2Q9NS61 270 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 C1RLQ9NZP8 487 aa13.89□□□□□ -0.19
LRPPRC-203ENST00000409946 IGKV1D-37A0A075B6S9 117 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 UBE2CO00762 179 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 MT-CO2P00403 227 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 CRYGCP07315 174 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 GATA3P23771 443 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 SPATA31B1PQ5VZV4 182 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 MBD6Q96DN6 1003 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 RASL11BQ9BPW5 248 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 SRSF8Q9BRL6 282 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 CTDSP1Q9GZU7 261 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 CSPG4Q6UVK1 2322 aa13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
LRPPRC-203ENST00000409946 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 RPL35P42766 123 aaKnown RBP13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 IQCF2Q8IXL9 164 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 SSX3Q99909 188 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 MEGF9Q9H1U4 602 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 NAT8Q9UHE5 227 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 A0A1W2PPV4 95 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 HLA-DRB1P01911 266 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 ZNF90Q03938 601 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 CYP2G1PQ6ZSU1 146 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 GATAD1Q8WUU5 269 aa13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 GSX1Q9H4S2 264 aaPredicted RBP13.87□□□□□ -0.19
LRPPRC-203ENST00000409946 ZNF98A6NK75 572 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 CLDN34H7C241 214 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 CORTO00230 105 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 LY6EQ16553 131 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 THAP8Q8NA92 274 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 Q8WTZ3 238 aa13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
LRPPRC-203ENST00000409946 ZANQ9Y493 2812 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 I3L2K1 104 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 ETFRF1Q6IPR1 90 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 LINC01548A6NM66 108 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 H3BUX3 64 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 S100A8P05109 93 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 RPS10P46783 165 aaKnown RBP13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 BCL6BQ8N143 479 aaPredicted RBP13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 RBM14Q96PK6 669 aaKnown RBP13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 S4R3C0 116 aa13.85□□□□□ -0.19
LRPPRC-203ENST00000409946 TCRBV4S1A1TA0A5B7 111 aa13.84□□□□□ -0.19
LRPPRC-203ENST00000409946 K7EIM0 57 aa13.84□□□□□ -0.19
LRPPRC-203ENST00000409946 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
LRPPRC-203ENST00000409946 TGOLN2O43493 480 aa13.84□□□□□ -0.19
LRPPRC-203ENST00000409946 WFDC11Q8NEX6 87 aa13.84□□□□□ -0.19
LRPPRC-203ENST00000409946 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 AP4M1O00189 453 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 ARL14EPLP0DKL9 152 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 ZNF343Q6P1L6 599 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 MIR17HGQ75NE6 70 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 TMEM116Q8NCL8 245 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 TNFRSF19Q9NS68 423 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 DOK5Q9P104 306 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 MOB4Q9Y3A3 225 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 J3QLI3 93 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 AMY1AP04745 511 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 CXCL1P09341 107 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 MEOX2P50222 304 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 ECSCRQ19T08 205 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 FAM78BQ5VT40 261 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 PRSS57Q6UWY2 283 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 TTC9CQ8N5M4 171 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 C12orf57Q99622 126 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 TXNDC17Q9BRA2 123 aa13.83□□□□□ -0.2
LRPPRC-203ENST00000409946 PDE6DO43924 150 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 RHOBP62745 196 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 OR4F5Q8NH21 305 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 OR4F4Q96R69 305 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 TCEAL7Q9BRU2 100 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 URGCP-MRPS24S4R325 110 aa13.82□□□□□ -0.2
LRPPRC-203ENST00000409946 GCN1Q92616 2671 aaKnown RBP13.81□□□□□ -0.2
LRPPRC-203ENST00000409946 IGLV11-55A0A075B6I3 123 aa13.81□□□□□ -0.2
LRPPRC-203ENST00000409946 TRBV24-1A0A075B6N3 115 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms