RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TRAV13-1A0A0B4J241 112 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 E9PLN8 166 aa7.01□□□□□ -1.29
SCN9A-203ENST00000409672 SSBP2P81877 361 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-203ENST00000409672 TM4SF5O14894 197 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 C5orf66Q9H5L9 145 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 MPTX1A8MV57 137 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 COTL1Q14019 142 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 RNF182Q8N6D2 247 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 F8VVB4 439 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 F8VWA3 439 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 HOXB1P14653 301 aaPredicted RBP7□□□□□ -1.29
SCN9A-203ENST00000409672 KNCNA6PVL3 124 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 DKK4Q9UBT3 224 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 NDUFS5O43920 106 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 CXCL2P19875 107 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 TRAF4Q9BUZ4 470 aaPredicted RBP7□□□□□ -1.29
SCN9A-203ENST00000409672 MSRB2Q9Y3D2 182 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 HIGD1CA8MV81 97 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 C1orf159Q96HA4 380 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 DEPPQ9NTK1 212 aa7□□□□□ -1.29
SCN9A-203ENST00000409672 COL8A2P25067 703 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 DAD1P61803 113 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 Q96M66 194 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 RPUSD1Q9UJJ7 312 aaKnown RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 RNF114Q9Y508 228 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 A0A087WWL8 130 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 B4DSR2 109 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 PSPNO60542 156 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 TMEM200BQ69YZ2 307 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 EXOC3-AS1Q8N2X6 119 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 G6PC2Q9NQR9 355 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 IGHV1-46P01743 117 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF257Q9Y2Q1 563 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 MGAMO43451 1857 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 SRRM4A7MD48 611 aaKnown RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 TNS1Q9HBL0 1735 aaKnown RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 TRAV8-2A0A0B4J237 113 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 C10orf55Q5SWW7 151 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF708P17019 499 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 MEF2CQ06413 473 aaPredicted RBP6.99□□□□□ -1.29
SCN9A-203ENST00000409672 C6orf226Q5I0X4 101 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF114Q8NC26 417 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 PLAC1Q9HBJ0 212 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 LINC00312Q9Y6C7 94 aa6.99□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 LY75O60449 1722 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
SCN9A-203ENST00000409672 CCL1P22362 96 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 TMEM86BQ8N661 226 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 J3QW42 95 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 CD300EQ496F6 205 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-203ENST00000409672 SLC25A34Q6PIV7 304 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 SLC25A2Q9BXI2 301 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 TNCP24821 2201 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 IGHV2-26A0A0B4J1V2 119 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 F8WEM9 126 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 COX19Q49B96 90 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 GSN-AS1Q9NRJ2 163 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 FRMPD3Q5JV73 1810 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 M0QZK8 103 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 SPSB3Q6PJ21 355 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 TRAV5A0A0B4J249 113 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 HLA-DQA1P01909 254 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 EFNA4P52798 201 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 PARD6GQ9BYG4 376 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-203ENST00000409672 A0A1B0GUT8 65 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 ZNF250P15622 560 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 POC1AQ8NBT0 407 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 FGFBP3Q8TAT2 258 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 COL4A5P29400 1685 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 PKIAP61925 76 aa6.98□□□□□ -1.29
SCN9A-203ENST00000409672 ADAMTS7Q9UKP4 1686 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 RND3P61587 244 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 TEX38Q6PEX7 206 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 DEFB105AQ8NG35 78 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 FMC1Q96HJ9 113 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 IFT22Q9H7X7 185 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 THAP8Q8NA92 274 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 A0A1B0GWB2 263 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 PMS2P5A8MQ11 134 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 E9PQ18 207 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 NCR2O95944 276 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 DSCR9P59020 149 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 TMEM187Q14656 261 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 OSR1Q8TAX0 266 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 PLPPR1Q8TBJ4 325 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 FABP5P3A8MUU1 101 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 RIPPLY2Q5TAB7 128 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 COL5A3P25940 1745 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-203ENST00000409672 ARHGAP21Q5T5U3 1957 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 VAX1Q5SQQ9 334 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 OR2K2Q8NGT1 345 aa6.97□□□□□ -1.29
SCN9A-203ENST00000409672 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms