RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SCGB1C2P0DMR2 95 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 MPV17P39210 176 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LPAR6P43657 344 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 C1DQ13901 141 aaKnown RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 MEIG1Q5JSS6 88 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LHFPL1Q86WI0 220 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 YIPF7Q8N8F6 280 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 BPIFB6Q8NFQ5 453 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SCGB1C1Q8TD33 95 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 CT55Q8WUE5 264 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 TWIST2Q8WVJ9 160 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 ITLN2Q8WWU7 325 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM106AQ96A25 262 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 STARD4Q96DR4 205 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SLC25A44Q96H78 314 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR4C12Q96R67 309 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 PEBP4Q96S96 227 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 POMPQ9Y244 141 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 AP4S1Q9Y587 144 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 ERVK-7P63135 1459 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SHANK2Q9UPX8 1470 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 KIF1AQ12756 1690 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 EPRSP07814 1512 aaKnown RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 KIF13BQ9NQT8 1826 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 RPRD2Q5VT52 1461 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 NRXN1Q9ULB1 1477 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ODAMA1E959 279 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 B4DEV8 164 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FNDC10F2Z333 226 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGHG2P01859 326 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SHBGP04278 402 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 HLA-DQB2P05538 268 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SPINK8P0C7L1 97 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 NUDT2P50583 147 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FUT5Q11128 374 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MMDQ15546 238 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 C10orf91Q5T1B1 145 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MRPL2Q5T653 305 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM244Q5VVB8 128 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM14EPQ6UXP3 125 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FAM19A3Q7Z5A8 133 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZFP62Q8NB50 900 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 APCDD1LQ8NCL9 501 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR51T1Q8NGJ9 327 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 KLF14Q8TD94 323 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 HYLS1Q96M11 299 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF586Q9NXT0 402 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SPANXCQ9NY87 97 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 RPUSD1Q9UJJ7 312 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 PCYT1BQ9Y5K3 369 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 DISP1Q96F81 1524 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SCN4AP35499 1836 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 DNMT1P26358 1616 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZCCHC11Q5TAX3 1644 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MAGI2Q86UL8 1455 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 ARAP3Q8WWN8 1544 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 UGGT2Q9NYU1 1516 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRDV1A0A1B0GX56 115 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 LRCOL1A6NCL2 159 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR51F1A6NGY5 319 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 RIIAD1A6NNX1 92 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 F5H5P2 479 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 GABARAPH6UMI1 98 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 M0R129 80 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 NDUFC2O95298 119 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 CFDP00746 253 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 GPX1P07203 203 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 H2BFSP57053 126 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 MOBPQ13875 183 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 FKBP1CQ5VVH2 108 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 TTC9CQ8N5M4 171 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 LY6G5BQ8NDX9 201 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR52R1Q8NGF1 315 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 HIST1H2BLQ99880 126 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 WDR61Q9GZS3 305 aaKnown RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 SMCO4Q9NRQ5 59 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 AMMECR1Q9Y4X0 333 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 MYH13Q9UKX3 1938 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 ABCA3Q99758 1704 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 A2ML1A8K2U0 1454 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZSWIM8A7E2V4 1837 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 BRWD3Q6RI45 1802 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 KDM5CP41229 1560 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATG2AQ2TAZ0 1938 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 hCG_1818297A0A087WSY0 165 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGHV3-43A0A0B4J1X8 118 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRAV5A0A0B4J249 113 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRAV4A0A0B4J268 109 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TEX50A0A1B0GTY4 177 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 GGT3PA6NGU5 568 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 A8MT66 165 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 A8MUU9 505 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms