RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 NAA38Q9BRA0 125 aaKnown RBP11.5□□□□□ -0.57
HMGA2-204ENST00000403681 KBTBD11-OT1A0A1B0GTJ5 212 aa11.5□□□□□ -0.57
HMGA2-204ENST00000403681 CECR9P0C854 216 aa11.5□□□□□ -0.57
HMGA2-204ENST00000403681 IGHV1-2P23083 117 aa11.5□□□□□ -0.57
HMGA2-204ENST00000403681 OR2K2Q8NGT1 345 aa11.5□□□□□ -0.57
HMGA2-204ENST00000403681 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
HMGA2-204ENST00000403681 HEATR1Q9H583 2144 aaKnown RBP11.49□□□□□ -0.57
HMGA2-204ENST00000403681 FREM1Q5H8C1 2179 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 DEFB109BQ30KR1 87 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 Q6ZT83 130 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 CNOT1A5YKK6 2376 aaKnown RBP11.49□□□□□ -0.57
HMGA2-204ENST00000403681 DOPEY2Q9Y3R5 2298 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 CADP27708 2225 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 SEC11AP67812 179 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 TMEM189A5PLL7 270 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 ORM1P02763 201 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 WNT2P09544 360 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 CDKN1BP46527 198 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 FOXA2Q9Y261 457 aaPredicted RBP11.49□□□□□ -0.57
HMGA2-204ENST00000403681 A0A1W2PRD5 423 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 A0A1W2PRF3 423 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 A0A1W2PRM7 423 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
HMGA2-204ENST00000403681 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 OR4C13Q8NGP0 309 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
HMGA2-204ENST00000403681 DPF1Q92782 380 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
HMGA2-204ENST00000403681 PCDH15Q96QU1 1955 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 VDAC2P45880 294 aaPredicted RBP11.48□□□□□ -0.57
HMGA2-204ENST00000403681 CCL8P80075 99 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 MLANAQ16655 118 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 SPTBN2O15020 2390 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 CD5LO43866 347 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 GPR179Q6PRD1 2367 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 RPEQ96AT9 228 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 FRMD6-AS1P0C7T7 363 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 ZNF138P52744 262 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 ADAMTS9Q9P2N4 1935 aa11.48□□□□□ -0.57
HMGA2-204ENST00000403681 TWIST1Q15672 202 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 FMC1Q96HJ9 113 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 GGTLC3B5MD39 225 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 WDR86Q86TI4 376 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
HMGA2-204ENST00000403681 Q0VFX4 171 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 GP6Q9HCN6 339 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 PMS2P5A8MQ11 134 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 CIDEAO60543 219 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 CD177Q8N6Q3 437 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
HMGA2-204ENST00000403681 COX7A1P24310 79 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 ERVK11-1P61568 191 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 Q9H3A6 140 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 INSIG2Q9Y5U4 225 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 ZNF785A8K8V0 405 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 HAX1O00165 279 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 PSG9Q00887 426 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 C5orf30Q96GV9 206 aa11.46□□□□□ -0.57
HMGA2-204ENST00000403681 GNG7O60262 68 aa11.46□□□□□ -0.58
HMGA2-204ENST00000403681 ASPHD1Q5U4P2 390 aa11.46□□□□□ -0.58
HMGA2-204ENST00000403681 PRELID3AQ96N28 172 aa11.46□□□□□ -0.58
HMGA2-204ENST00000403681 C18orf15Q96N68 181 aa11.46□□□□□ -0.58
HMGA2-204ENST00000403681 ESDP10768 282 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 DKK1O94907 266 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 MC5RP33032 325 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 KIR2DL2P43627 348 aaPredicted RBP11.45□□□□□ -0.58
HMGA2-204ENST00000403681 KRTAP27-1Q3LI81 207 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 C1orf210Q8IVY1 113 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 TCRBV4S1A1TA0A5B7 111 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 COX6B1P14854 86 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
HMGA2-204ENST00000403681 POLEQ07864 2286 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 IGHV2-70DA0A0C4DH43 119 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 IGLV2-14P01704 120 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 WFDC3Q8IUB2 231 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 FAM216BQ8N7L0 139 aa11.45□□□□□ -0.58
HMGA2-204ENST00000403681 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
HMGA2-204ENST00000403681 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
HMGA2-204ENST00000403681 TRIP6Q15654 476 aaKnown RBP11.44□□□□□ -0.58
HMGA2-204ENST00000403681 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 TMEM108Q6UXF1 575 aa11.43□□□□□ -0.58
HMGA2-204ENST00000403681 CACNG7P62955 275 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms