RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 TMEM189A5PLL7 270 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 ZNF705FA8MVS1 300 aaPredicted RBP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 NOL3O60936 208 aaKnown RBP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 HNRNPCP07910 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 ZNF705DP0CH99 300 aaPredicted RBP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 ZNF705BP0CI00 300 aaPredicted RBP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 PGAM2P15259 253 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 RPS19P39019 145 aaKnown RBP10.36□□□□□ -0.75
VAMP1-203ENST00000400911 AKR1C2P52895 323 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 FXYD7P58549 80 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 CROCCP3Q8IVE0 287 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 Q8WTZ3 238 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 TP53RKQ96S44 253 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
VAMP1-203ENST00000400911 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 IGLC1P0CG04 106 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 HLA-DRB4P13762 266 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 HTN3P15516 51 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 DHODHQ02127 395 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 RNF212Q495C1 297 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 OR1S2Q8NGQ3 325 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 HLA-DRB4X5D2U9 266 aa10.35□□□□□ -0.75
VAMP1-203ENST00000400911 APOBP04114 4563 aaKnown RBP10.35□□□□□ -0.75
VAMP1-203ENST00000400911 MUC4Q99102 2169 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 A0A0G2JRQ6 117 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 RPS10-NUDT3A0A1W2PQS6 291 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 M0QYG6 137 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 OR10J1P30954 320 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 RND2P52198 227 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 PIGPP57054 158 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 DEFB1P60022 68 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 RND3P61587 244 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 USF2Q15853 346 aaPredicted RBP10.34□□□□□ -0.75
VAMP1-203ENST00000400911 SP6Q3SY56 376 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 FAM222AQ5U5X8 452 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 SIGLEC15Q6ZMC9 328 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
VAMP1-203ENST00000400911 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 HERC1Q15751 4861 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 AGRNO00468 2067 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
VAMP1-203ENST00000400911 C3orf85A0A1B0GTC6 90 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 CCDC160A6NGH7 325 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 BUB3O43684 328 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 ATG12O94817 140 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 IL4P05112 153 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 NKX2-1P43699 371 aaPredicted RBP10.33□□□□□ -0.76
VAMP1-203ENST00000400911 ALDH3B2P48448 385 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 YPEL3P61236 119 aaPredicted RBP10.33□□□□□ -0.76
VAMP1-203ENST00000400911 TRIM16LQ309B1 348 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 RRNAD1Q96FB5 475 aaKnown RBP10.33□□□□□ -0.76
VAMP1-203ENST00000400911 SCPEP1Q9HB40 452 aa10.33□□□□□ -0.76
VAMP1-203ENST00000400911 SMIM31A0A1B0GVY4 71 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 CDK2AP2O75956 126 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 RCVRNP35243 200 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 HTR2BP41595 481 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 SPCS3P61009 180 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 TNP2Q05952 138 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 GPR107Q5VW38 600 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 TMEM88Q6PEY1 159 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 YIPF6Q96EC8 236 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 ZNF486Q96H40 463 aaPredicted RBP10.32□□□□□ -0.76
VAMP1-203ENST00000400911 LINC00052Q96N35 136 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 FUNDC2Q9BWH2 189 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 COMMD3Q9UBI1 195 aa10.32□□□□□ -0.76
VAMP1-203ENST00000400911 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 RD3LP0DJH9 198 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 SLC25A4P12235 298 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 LSM3P62310 102 aaKnown RBP10.31□□□□□ -0.76
VAMP1-203ENST00000400911 CLVS1Q8IUQ0 354 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-203ENST00000400911 ZNF709Q8N972 641 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 RNASE11Q8TAA1 199 aaKnown RBP10.31□□□□□ -0.76
VAMP1-203ENST00000400911 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 HEYLQ9NQ87 328 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-203ENST00000400911 NDUFA13Q9P0J0 144 aa10.31□□□□□ -0.76
VAMP1-203ENST00000400911 NXPH3O95157 252 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 OXA1LQ15070 435 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 GSG1LQ6UXU4 331 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 LHFPL1Q86WI0 220 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 OR4B1Q8NGF8 309 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 RNASEH2CQ8TDP1 164 aaKnown RBP10.3□□□□□ -0.76
VAMP1-203ENST00000400911 ACY3Q96HD9 319 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 WDR12Q9GZL7 423 aaKnown RBP10.3□□□□□ -0.76
VAMP1-203ENST00000400911 SAV1Q9H4B6 383 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-203ENST00000400911 COPZ2Q9P299 210 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 TMED3Q9Y3Q3 217 aa10.3□□□□□ -0.76
VAMP1-203ENST00000400911 YTHDF2Q9Y5A9 579 aaKnown RBP10.3□□□□□ -0.76
VAMP1-203ENST00000400911 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
VAMP1-203ENST00000400911 GSTZ1O43708 216 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-203ENST00000400911 TOMM40O96008 361 aa10.29□□□□□ -0.76
VAMP1-203ENST00000400911 APOA1P02647 267 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms