RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 SAV1Q9H4B6 383 aaPredicted RBP12.6□□□□□ -0.39
UFD1-202ENST00000399523 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 NUDT3O95989 172 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 OPRK1P41145 380 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 SCAND1P57086 179 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 SIGLEC15Q6ZMC9 328 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 FOXI2Q6ZQN5 318 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 MRGPRFQ96AM1 343 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 Q9H8V8 135 aa12.59□□□□□ -0.39
UFD1-202ENST00000399523 RRP15Q9Y3B9 282 aaKnown RBP12.59□□□□□ -0.39
UFD1-202ENST00000399523 MEIS3P1A6NDR6 274 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 BUB3O43684 328 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 PHLDA2Q53GA4 152 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 OR5H6Q8NGV6 325 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 Q8WTZ3 238 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
UFD1-202ENST00000399523 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
UFD1-202ENST00000399523 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 YPEL3P61236 119 aaPredicted RBP12.57□□□□□ -0.4
UFD1-202ENST00000399523 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
UFD1-202ENST00000399523 ZNF79Q15937 498 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 TBC1D26Q86UD7 250 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 FRZBQ92765 325 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 VCXQ9H320 206 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
UFD1-202ENST00000399523 ANAPC10Q9UM13 185 aa12.57□□□□□ -0.4
UFD1-202ENST00000399523 A0A0B4J293 547 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 PMP2P02689 132 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 S100GP29377 79 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 PSG9Q00887 426 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 DHODHQ02127 395 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 SSX7Q7RTT5 188 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 OR4B1Q8NGF8 309 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 OR6F1Q8NGZ6 308 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 Q9H3A6 140 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 SCPEP1Q9HB40 452 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 IFT46Q9NQC8 304 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
UFD1-202ENST00000399523 P0C879 139 aa12.55□□□□□ -0.4
UFD1-202ENST00000399523 SPATA31B1PQ5VZV4 182 aa12.55□□□□□ -0.4
UFD1-202ENST00000399523 F5H768 121 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
UFD1-202ENST00000399523 PAX9P55771 341 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 TAS2R46P59540 309 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 LPCAT3Q6P1A2 487 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 OR5H2Q8NGV7 314 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 LINC00052Q96N35 136 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 WDR12Q9GZL7 423 aaKnown RBP12.54□□□□□ -0.4
UFD1-202ENST00000399523 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
UFD1-202ENST00000399523 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 IL4P05112 153 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 NAT1P18440 290 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 OR10J1P30954 320 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 ETV6P41212 452 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 RORCP51449 518 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 PRSS54Q6PEW0 395 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
UFD1-202ENST00000399523 IGKV1-5P01602 117 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 DEFB130BP0DP73 79 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 DEFB130AP0DP74 79 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 ID1P41134 155 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 HSPA13P48723 471 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 PSMB3P49720 205 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 RND2P52198 227 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 TAS2R20P59543 309 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 CLINT1Q14677 625 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 PTTG2Q9NZH5 202 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 KLK11Q9UBX7 282 aa12.52□□□□□ -0.41
UFD1-202ENST00000399523 M0QYG6 137 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 SOCS3O14543 225 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 ATP5G1P05496 136 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 SDC2P34741 201 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 ATP5G3P48201 142 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 DLK1P80370 383 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 IGF2BP2-AS1Q96M15 143 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 TMEM208Q9BTX3 173 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 PDCD10Q9BUL8 212 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 ENY2Q9NPA8 101 aa12.51□□□□□ -0.41
UFD1-202ENST00000399523 A0A0J9YX75 114 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 F6UB75 175 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 PRM2P04554 102 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 SLC25A4P12235 298 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 PSMB9P28065 219 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 TSPOP30536 169 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 IDNKQ5T6J7 187 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 COQ8AQ8NI60 647 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 UPK3BQ9BT76 320 aa12.5□□□□□ -0.41
UFD1-202ENST00000399523 CBY3A6NI87 242 aa12.49□□□□□ -0.41
UFD1-202ENST00000399523 A8MTW9 85 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms