RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 HBDP02042 147 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
GNE-202ENST00000396594 CNTFRP26992 372 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 CFHR2P36980 270 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 ERVK11-1P61568 191 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 FAM201AQ5SY85 155 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 C8orf31Q8N9H6 132 aa12.89□□□□□ -0.35
GNE-202ENST00000396594 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 DDTP30046 118 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 IGKV1-12A0A0C4DH73 117 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 IGKV1D-12P01611 117 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 QRFPP83859 136 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 FOXL1Q12952 345 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 UBE2E1P51965 193 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 FOXF2Q12947 444 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 SPATA31B1PQ5VZV4 182 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 ZNF319Q9P2F9 582 aa12.88□□□□□ -0.35
GNE-202ENST00000396594 TSC2P49815 1807 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 RNASE4P34096 147 aaKnown RBP12.87□□□□□ -0.35
GNE-202ENST00000396594 TRAV40A0A0B4J280 105 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 H3BVH4 76 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 GFI1Q99684 422 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 MCRIP2Q9BUT9 160 aaKnown RBP12.87□□□□□ -0.35
GNE-202ENST00000396594 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 TYMSP04818 313 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 ZNF25P17030 456 aaPredicted RBP12.87□□□□□ -0.35
GNE-202ENST00000396594 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 H3BUA1 57 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 M0R381 172 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
GNE-202ENST00000396594 C7orf71A4D174 169 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 ZNF474Q6S9Z5 364 aaPredicted RBP12.86□□□□□ -0.35
GNE-202ENST00000396594 TREML4Q6UXN2 200 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 GGTLC1Q9BX51 225 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 MS4A6AQ9H2W1 248 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 IGHV3OR16-10A0A075B7F0 116 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 ATP5G3P48201 142 aa12.86□□□□□ -0.35
GNE-202ENST00000396594 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 C1QL4Q86Z23 238 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 FAM110DQ8TAY7 271 aaPredicted RBP12.85□□□□□ -0.35
GNE-202ENST00000396594 GPHA2Q96T91 129 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 KNTC1P50748 2209 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 FAM231BA6NCW3 169 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 PIP4P1Q86T03 277 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 PRDM13Q9H4Q3 707 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 TMEM50AO95807 157 aa12.85□□□□□ -0.35
GNE-202ENST00000396594 ZNF138P52744 262 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 YPEL3P61236 119 aaPredicted RBP12.84□□□□□ -0.35
GNE-202ENST00000396594 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
GNE-202ENST00000396594 CD7P09564 240 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 C1orf122Q6ZSJ8 110 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 LOC107984156A0A0G2JMH3 177 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 ARL17AQ8IVW1 177 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 SIGLEC9Q9Y336 463 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 CBLN1P23435 193 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
GNE-202ENST00000396594 MORN3Q6PF18 240 aaPredicted RBP12.84□□□□□ -0.35
GNE-202ENST00000396594 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
GNE-202ENST00000396594 PLXNA4Q9HCM2 1894 aa12.84□□□□□ -0.35
GNE-202ENST00000396594 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.35
GNE-202ENST00000396594 MRPL52Q86TS9 123 aaKnown RBP12.83□□□□□ -0.35
GNE-202ENST00000396594 DPM2O94777 84 aa12.83□□□□□ -0.36
GNE-202ENST00000396594 SLC25A20O43772 301 aa12.83□□□□□ -0.36
GNE-202ENST00000396594 PLP1P60201 277 aa12.83□□□□□ -0.36
GNE-202ENST00000396594 Q5BKY6 102 aa12.83□□□□□ -0.36
GNE-202ENST00000396594 TNFSF13O75888 250 aa12.83□□□□□ -0.36
GNE-202ENST00000396594 RAMP3O60896 148 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 TDRD6O60522 2096 aaKnown RBP12.82□□□□□ -0.36
GNE-202ENST00000396594 IGKV1-27A0A075B6S5 117 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 GNLYP22749 145 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 INSP01308 110 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 CRPP02741 224 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 PLEKHB2Q96CS7 222 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 MESP1Q9BRJ9 268 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 RHODO00212 210 aa12.82□□□□□ -0.36
GNE-202ENST00000396594 VWA8A3KMH1 1905 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 IGLV1-44P01699 117 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 PLAURQ03405 335 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 A6NNC1 897 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 CT83Q5H943 113 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 CLDN16Q9Y5I7 305 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 MSMBP08118 114 aa12.81□□□□□ -0.36
GNE-202ENST00000396594 FOXC2Q99958 501 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms