RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 NPIPB6E9PJ23 425 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SYS1-DBNDD2H3BUS1 97 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SIVA1O15304 175 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SUB1P53999 127 aaKnown RBP eCLIP4.13□□□□□ -1.75
FGD4-201ENST00000395740 PLP1P60201 277 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 HBBP68871 147 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 ERHP84090 104 aaKnown RBP4.13□□□□□ -1.75
FGD4-201ENST00000395740 C17orf58Q2M2W7 97 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 FAM120AOSQ5T036 256 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 ZNF329Q86UD4 541 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 OR1N2Q8NGR9 330 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 FMC1Q96HJ9 113 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SLC25A2Q9BXI2 301 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 SPTBN2O15020 2390 aa4.13□□□□□ -1.75
FGD4-201ENST00000395740 URB1O60287 2271 aaKnown RBP4.13□□□□□ -1.75
FGD4-201ENST00000395740 IGKV1D-17A0A075B6S4 117 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TEX50A0A1B0GTY4 177 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TCRBV4S1A1TA0A5B7 111 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 C19orf71A6NCJ1 209 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 OR4C46A6NHA9 309 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 WNT9BO14905 357 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TIMM8AO60220 97 aaPredicted RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 FRMD6-AS1P0C7T7 363 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 CEBPDP49716 269 aaPredicted RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 HINT1P49773 126 aaPredicted RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 MFAP2P55001 183 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 RPS16P62249 146 aaKnown RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 ALKBH6Q3KRA9 238 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TMEM177Q53S58 311 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 BVES-AS1Q5T3Y7 98 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 SLC25A48Q6ZT89 311 aaKnown RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 TMEM178AQ8NBL3 297 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 VSTM2AQ8TAG5 236 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 LRRC29Q8WV35 223 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 SNRNP40Q96DI7 357 aaKnown RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 GPR82Q96P67 336 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 NDUFA4L2Q9NRX3 87 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 PEF1Q9UBV8 284 aaKnown RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 FRYQ5TBA9 3013 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 DIDO1Q9BTC0 2240 aaKnown RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 IGHV3-43A0A0B4J1X8 118 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 FSTL3O95633 263 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 IGHV3-13P01766 116 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 THBDP07204 575 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 IGHV3-43DP0DP04 118 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 ZNF134P52741 427 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 KIAA1644Q3SXP7 199 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 CT45A1Q5HYN5 189 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 LINC01545Q5VT33 79 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 UNQ5815/PRO19632Q6UWF5 114 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 ZNF833PQ6ZTB9 187 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 CT45A3Q8NHU0 189 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 TMEM167AQ8TBQ9 72 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 PIFOQ8TCI5 191 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 URB1-AS1Q96HZ7 61 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 LOXL4Q96JB6 756 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 PAXXQ9BUH6 204 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 SSBP4Q9BWG4 385 aaPredicted RBP4.12□□□□□ -1.75
FGD4-201ENST00000395740 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 WNT10AQ9GZT5 417 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 EPDR1Q9UM22 224 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 RNF24Q9Y225 148 aa4.12□□□□□ -1.75
FGD4-201ENST00000395740 IGKV1OR2-108A0A075B7D4 117 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 SMAD7O15105 426 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 LEPROTL1O95214 131 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 CRYGCP07315 174 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 CELA3BP08861 270 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 SAA2P0DJI9 122 aaPredicted RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 MGST1P10620 155 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 NTF3P20783 257 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 UBE2L3P68036 154 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 FXYD3Q14802 87 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 RPL39P5Q59GN2 51 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 GDF5OSQ5U4N7 250 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 C10orf113Q5VZT2 155 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 Q6AWC8 147 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 RBPMS2Q6ZRY4 209 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 ZNF826PQ6ZT77 177 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 ZCCHC24Q8N2G6 241 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 FAM19A2Q8N3H0 131 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 LINC00311Q8N616 119 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 OR10X1Q8NGY0 326 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 FXYD5Q96DB9 178 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 PERPQ96FX8 193 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 TRGV9Q99603 122 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 RPP21Q9H633 154 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 PLSCR4Q9NRQ2 329 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 SERTAD4Q9NUC0 356 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 OTOGLQ3ZCN5 2332 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 HIGD1CA8MV81 97 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 DEFB108AA8MXU0 73 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 EIF4EBP3O60516 100 aaPredicted RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 LTAP01374 205 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 COX8AP10176 69 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 HOXB4P17483 251 aaPredicted RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 MEF2CQ06413 473 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms