RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CLN5O75503 358 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 RANP62826 216 aaKnown RBP8.9□□□□□ -0.98
TCOF1-203ENST00000394269 OR5I1Q13606 314 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 C10orf113Q5VZT2 155 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 FAM71F2Q6NXP2 309 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 WNT10AQ9GZT5 417 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 F6UZH7 168 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 SPINK4O60575 86 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 FOLR2P14207 255 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 AGAP20933 346 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 CEACAM3P40198 252 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 COMPP49747 757 aaPredicted RBP8.9□□□□□ -0.98
TCOF1-203ENST00000394269 FXYD3Q14802 87 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 DYNAPQ8N1N2 210 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 OCC1Q8TAD7 63 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 CACNG8Q8WXS5 425 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 LINC00479Q96M42 142 aa8.9□□□□□ -0.98
TCOF1-203ENST00000394269 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 IGHV3-23P01764 117 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 MGST1P10620 155 aaKnown RBP8.9□□□□□ -0.99
TCOF1-203ENST00000394269 TAS2R45P59539 299 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 MRGPRG-AS1Q2M3A8 158 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 YPEL4Q96NS1 127 aa8.9□□□□□ -0.99
TCOF1-203ENST00000394269 SH2D7A6NKC9 451 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 C8orf88P0DMB2 117 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 PRTN3P24158 256 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 LYZP61626 148 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 LINC01551Q86U37 167 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 EAF1Q96JC9 268 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 IGHV3-35A0A0C4DH35 117 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 SLC17A3O00476 420 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 GPX4P36969 197 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 EFNA4P52798 201 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 DTX2Q86UW9 622 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 MDFIC2A0A1B0GVS7 189 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 A6NNC1 897 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 MRPL41Q8IXM3 137 aaKnown RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 LY6G5BQ8NDX9 201 aa8.89□□□□□ -0.99
TCOF1-203ENST00000394269 RNASEH2CQ8TDP1 164 aaKnown RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 UBR5O95071 2799 aaPredicted RBP8.89□□□□□ -0.99
TCOF1-203ENST00000394269 IGHV3OR16-8A0A075B7F1 116 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 TRAV34A0A0B4J273 112 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 CXorf65A6NEN9 183 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 HELTA6NFD8 242 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 IFITM10A6NMD0 228 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 PPP5D1E7EU14 171 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 UBE2CO00762 179 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 PQLC2Q6ZP29 291 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 FRZBQ92765 325 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 SERTAD4Q9NUC0 356 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 ZANQ9Y493 2812 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 WNK1Q9H4A3 2382 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 TCRBV4S1A1TA0A5B7 111 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 NBR2O15453 112 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 IGHV2-5P01817 119 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 ZNF503Q96F45 646 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 PAXXQ9BUH6 204 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 GSN-AS1Q9NRJ2 163 aa8.88□□□□□ -0.99
TCOF1-203ENST00000394269 ZNF320A2RRD8 509 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 ERVFC1-1P60608 527 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 SLC35B1P78383 322 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 GFI1BQ5VTD9 330 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 PATE2Q6UY27 113 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 SGMS2Q8NHU3 365 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 TMEM167BQ9NRX6 74 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 IGKV1D-37A0A075B6S9 117 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 TRGC1P0CF51 173 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 PMS2P11Q13670 270 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 AP4M1O00189 453 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 GNG4P50150 75 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 ATP5IP56385 69 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-203ENST00000394269 BPIFB3P59826 476 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 ETFRF1Q6IPR1 90 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 C8orf46Q8TAG6 207 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 CTDSP1Q9GZU7 261 aa8.87□□□□□ -0.99
TCOF1-203ENST00000394269 GGTLC3B5MD39 225 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TEX22C9J3V5 150 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 LY6LH3BQJ8 138 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 S100A9P06702 114 aaKnown RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 RNF224P0DH78 156 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TCL1AP56279 114 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 TIGITQ495A1 244 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
TCOF1-203ENST00000394269 FAM120AOSQ5T036 256 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 PRR27Q6MZM9 219 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 OR2T10Q8NGZ9 312 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
TCOF1-203ENST00000394269 PERPQ96FX8 193 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms