RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NPIPB3Q92617 1050 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 MARC2Q969Z3 335 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR10C1Q96KK4 312 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 SEC22CQ9BRL7 303 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 CCDC32Q9BV29 185 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 RHPN1-AS1Q9BWJ2 59 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 TUBA4BQ9H853 241 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 SRD5A3Q9H8P0 318 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 RETNQ9HD89 108 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 NUDT15Q9NV35 164 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 GAR1Q9NY12 217 aaKnown RBP5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 PTTG2Q9NZH5 202 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 SMPXQ9UHP9 88 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 U3KQK5 164 aa5.74□□□□□ -1.49
HMGB3P1-201ENST00000393368 TRAV14DV4A0A0A6YYC5 116 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RPS10-NUDT3A0A1W2PQS6 291 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RBMY1BA6NDE4 496 aaKnown RBP5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RBMY1EA6NEQ0 496 aaKnown RBP5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 K7EMT4 169 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 SCGB1D2O95969 90 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 TCRBP04435 133 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 IFNA4P05014 189 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RBMY1DP0C7P1 496 aaKnown RBP5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGLC1P0CG04 106 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR10J1P30954 320 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 POLR2GP62487 172 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 IFITM3Q01628 133 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 ZNF846Q147U1 533 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 ZNF124Q15973 351 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 HAGHQ16775 308 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 GBGT1Q8N5D6 347 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RNASEH2CQ8TDP1 164 aaKnown RBP5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 S100ZQ8WXG8 99 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 RCHY1Q96PM5 261 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 CITED4Q96RK1 184 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 U3KQ87 197 aa5.73□□□□□ -1.49
HMGB3P1-201ENST00000393368 FAM240BA0A1B0GVZ2 78 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 A8MZ25 164 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 FAM90A26D6RGX4 464 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 TSPAN4O14817 238 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SYNGR2O43760 224 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SSSCA1O60232 199 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 UPK1BO75841 260 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 CCNKO75909 580 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 DFFBO76075 338 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 H2AFB2P0C5Z0 115 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 NHLRC4P0CG21 123 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SLC25A4P12235 298 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SLC25A6P12236 298 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 GAMTQ14353 236 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 ODF3L2Q3SX64 289 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SPANXN5Q5MJ07 72 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 GSG1LQ6UXU4 331 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 LINC00299Q6ZSB3 139 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 TCF24Q7RTU0 167 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 WFDC3Q8IUB2 231 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR4D5Q8NGN0 318 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 OR1S2Q8NGQ3 325 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 MITD1Q8WV92 249 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 SPAG8Q99932 426 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 FAM110AQ9BQ89 295 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 GINS3Q9BRX5 216 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 GSKIPQ9P0R6 139 aa5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
HMGB3P1-201ENST00000393368 IGKV1D-37A0A075B6S9 117 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 TRAV25A0A0B4J276 109 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 PIGBOS1A0A0B4J2F0 54 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 FAM25EA8MYX2 175 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 MED6O75586 246 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 IFNA21P01568 189 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 IL4P05112 153 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 NKX2-1P43699 371 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 RPL11P62913 178 aaKnown RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZNF90Q03938 601 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 ASAH1Q13510 395 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR2F1Q13607 317 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 USF2Q15853 346 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 IAH1Q2TAA2 248 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 FAM90A2PQ658T7 463 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 LAMTOR1Q6IAA8 161 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 ETFRF1Q6IPR1 90 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 LINC00322Q6ZN03 302 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 NOXA1Q86UR1 476 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 APRG1Q8IVJ8 170 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 FAM24BQ8N5W8 94 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 SLC35E1Q96K37 410 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 METTL26Q96S19 204 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 WDR12Q9GZL7 423 aaKnown RBP5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 VSIRQ9H7M9 311 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 CACFD1Q9UGQ2 172 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 TENM3Q9P273 2699 aa5.71□□□□□ -1.5
HMGB3P1-201ENST00000393368 STARD9Q9P2P6 4700 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 IGKV1OR2-108A0A075B7D4 117 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 TRAV30A0A087WSZ9 112 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 OR4C46A6NHA9 309 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 ZFP92A6NM28 416 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 PRSS46E5RG02 174 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 SCGB2A1O75556 95 aa5.7□□□□□ -1.5
HMGB3P1-201ENST00000393368 TOMM40O96008 361 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms