RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 LHX2P50458 406 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 RASL11AQ6T310 242 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 TNFRSF14Q92956 283 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 C9JQL5 133 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 TGFBR3LH3BV60 316 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 TRGV3P03979 118 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 PAX1P15863 534 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
SHANK1-204ENST00000391814 MST1LQ2TV78 715 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 PRB3Q04118 309 aaPredicted RBP13.44□□□□□ -0.26
SHANK1-204ENST00000391814 C9orf153Q5TBE3 101 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 SMPXQ9UHP9 88 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 KIAA0100Q14667 2235 aaKnown RBP13.44□□□□□ -0.26
SHANK1-204ENST00000391814 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
SHANK1-204ENST00000391814 TREML4Q6UXN2 200 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 PLNP26678 52 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 NCOR1P1Q9H4R4 102 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 TRIP12Q14669 1992 aaPredicted RBP13.44□□□□□ -0.26
SHANK1-204ENST00000391814 FAM89BQ8N5H3 189 aa13.44□□□□□ -0.26
SHANK1-204ENST00000391814 CD7P09564 240 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 IGKV2-40A0A087WW87 121 aaPredicted RBP13.43□□□□□ -0.26
SHANK1-204ENST00000391814 IGKV2D-40P01614 121 aaPredicted RBP13.43□□□□□ -0.26
SHANK1-204ENST00000391814 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 ARPC1AQ92747 370 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 FGF11Q92914 225 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 SLC25A20O43772 301 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 LILRA1O75019 489 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 PCOLCEQ15113 449 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 FAM216BQ8N7L0 139 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 SLX1AQ9BQ83 275 aa13.43□□□□□ -0.26
SHANK1-204ENST00000391814 LINC01587Q99440 93 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 ASCL2Q99929 193 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
SHANK1-204ENST00000391814 MRPL27Q9P0M9 148 aaKnown RBP13.42□□□□□ -0.26
SHANK1-204ENST00000391814 RPRMLQ8N4K4 120 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 TM4SF5O14894 197 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 GAGE1Q13065 139 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 KLF12Q9Y4X4 402 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
SHANK1-204ENST00000391814 TRAV8-3A0A0A6YYJ7 113 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 PPBPP02775 128 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 RFPL3SP0C7P2 107 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 CELA3BP08861 270 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 TRGV2A0A075B6R0 118 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 C9JAW5 83 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 MLNRO43193 412 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 LYL1P12980 280 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 GATD1Q8NB37 220 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 LGALS1P09382 135 aaKnown RBP13.41□□□□□ -0.26
SHANK1-204ENST00000391814 CCL1P22362 96 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 TMEM42Q69YG0 159 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 PPP1R27Q86WC6 154 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 PIMREGQ9BSJ6 248 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 FBLN5Q9UBX5 448 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 WDR83OSQ9Y284 106 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.41□□□□□ -0.26
SHANK1-204ENST00000391814 TCRAP04437 139 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 STPG4Q8N801 248 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 SIGLEC12Q96PQ1 595 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
SHANK1-204ENST00000391814 DUSP15Q9H1R2 295 aaPredicted RBP13.41□□□□□ -0.26
SHANK1-204ENST00000391814 C9orf118A6NHY6 69 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 MORN2Q502X0 79 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 LHFPL1Q86WI0 220 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 TMEM238C9JI98 176 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 LINC00271P0C7V0 271 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 RPP25LQ8N5L8 163 aaKnown RBP13.4□□□□□ -0.26
SHANK1-204ENST00000391814 SMKR1H3BMG3 65 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 GAGE2AQ6NT46 116 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 PRSS57Q6UWY2 283 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 EXOC3-AS1Q8N2X6 119 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 NPIPB5A8MRT5 1133 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 AHRRA9YTQ3 701 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 GFRA3O60609 400 aa13.4□□□□□ -0.26
SHANK1-204ENST00000391814 C8orf46Q8TAG6 207 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
SHANK1-204ENST00000391814 CELA3AP09093 270 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 RNF125Q96EQ8 232 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 A0A0G2JMZ2 1700 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 C5orf24Q7Z6I8 188 aa13.39□□□□□ -0.27
SHANK1-204ENST00000391814 KNTC1P50748 2209 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 ARID1AO14497 2285 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 TIAF1O95411 115 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 MRAPQ8TCY5 172 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 F2Z2F3 143 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 AZU1P20160 251 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 Q6ZWC4 215 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 SS18L2Q9UHA2 77 aa13.38□□□□□ -0.27
SHANK1-204ENST00000391814 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 SLC25A48Q6ZT89 311 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms