RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PCP4L1A6NKN8 68 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 H0YCG3 227 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MKRN2OSH3BPM6 223 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ZNF701M0R085 212 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 M0R381 172 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ZNF593O00488 134 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MRASO14807 208 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MPDU1O75352 247 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 GADD45GO95257 159 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 COX4I1P13073 169 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ACYP2P14621 99 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MRPL19P49406 292 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TMEM33P57088 247 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TAS2R41P59536 307 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ELOF1P60002 83 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ERVS71-1P61550 626 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 VBP1P61758 197 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 SNRPD3P62318 126 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 BASP1P80723 227 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 CDK6Q00534 326 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 BST2Q10589 180 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TAF7Q15545 349 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 GRK1Q15835 563 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 CAVIN4Q5BKX8 364 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 C6orf226Q5I0X4 101 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ACTL10Q5JWF8 245 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 SPANXN3Q5MJ09 141 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TPRG1LQ5T0D9 272 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 CCDC70Q6NSX1 233 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 C11orf88Q6PI97 169 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TEX29Q8N6K0 151 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 SIGLECL1Q8N7X8 197 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 OR4C5Q8NGB2 326 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 OR4S1Q8NGB4 309 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 OR51A2Q8NGJ7 313 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 OR4A4PQ8NGN8 299 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TERB2Q8NHR7 220 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MCFD2Q8NI22 146 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 RAB37Q96AX2 223 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 LRRC45Q96CN5 670 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TMEM141Q96I45 108 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 PACRGQ96M98 296 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 XPO6Q96QU8 1125 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 RAB1BQ9H0U4 201 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 FBXL15Q9H469 300 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 DBNDD1Q9H9R9 158 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 TAF9BQ9HBM6 251 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 BCL2L10Q9HD36 194 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 BET1LQ9NYM9 111 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 EMC3Q9P0I2 261 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 MRPL36Q9P0J6 103 aaKnown RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 PSMC3IPQ9P2W1 217 aaPredicted RBP-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 APLNQ9ULZ1 77 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 SNX10Q9Y5X0 201 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 LY96Q9Y6Y9 160 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ROBO3Q96MS0 1386 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 SSC5DA1L4H1 1573 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 REREQ9P2R6 1566 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 PRUNE2Q8WUY3 3088 aa-0.87□□□□□ -2.55
TRAJ28-201ENST00000390509 ATP8B3O60423 1300 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 NSD3Q9BZ95 1437 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 PTPN23Q9H3S7 1636 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 TRAV9-1A0A075B6T8 112 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 TRAV27A0A087WT01 109 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 A0A087WVE0 104 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 TRAV8-1A0A0A6YYK1 113 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 C1orf232A0A0U1RR37 186 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 FAM240BA0A1B0GVZ2 78 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 DUXBA0A1W2PPF3 345 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 A0A1W2PRQ8 180 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 SYCE3A1L190 88 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 MGAT4DA6NG13 374 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 OR2AG2A6NM03 316 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 B4DSR2 109 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 C8orf87E5RJ46 101 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 LRRN3E7EW58 273 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 F8WDY8 70 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 G3V318 75 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 H7C2Y5 167 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 M0QYV0 167 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 M0R036 132 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 HUS1O60921 280 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 SCGB2A1O75556 95 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 SNX4O95219 450 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 GOSR1O95249 250 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 VAPBO95292 243 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 CD160O95971 181 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 CST1P01037 141 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 TCRBP04435 133 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 MT1FP04733 61 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 APOA4P06727 396 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 GP1BAP07359 652 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 SRP19P09132 144 aaKnown RBP-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 RD3LP0DJH9 198 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 PYYP10082 97 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 COX8AP10176 69 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 TNNI1P19237 187 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 CCND2P30279 289 aa-0.88□□□□□ -2.55
TRAJ28-201ENST00000390509 ANP32AP39687 249 aaKnown RBP-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms