RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TRAV26-1A0A087WT03 109 aa11.97□□□□□ -0.49
VPS9D1-201ENST00000389386 C3AR1Q16581 482 aa11.97□□□□□ -0.49
VPS9D1-201ENST00000389386 Q8IYB0 196 aa11.97□□□□□ -0.49
VPS9D1-201ENST00000389386 PSG11Q9UQ72 335 aa11.97□□□□□ -0.49
VPS9D1-201ENST00000389386 OOEPA6NGQ2 149 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 FCGR3BO75015 233 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 FTH1P19P0C7X4 201 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 CD24P25063 80 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 BHLHA15Q7RTS1 189 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 PIP4P1Q86T03 277 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 VKORC1L1Q8N0U8 176 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 VSTM2AQ8TAG5 236 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 SIGMAR1Q99720 223 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 TCF19Q9Y242 345 aa11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 SPENQ96T58 3664 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 CEBPDP49716 269 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-201ENST00000389386 MGAQ8IWI9 3026 aa11.96□□□□□ -0.5
VPS9D1-201ENST00000389386 H0Y8G0 127 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 PROP1O75360 226 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 RAB9AP51151 201 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 PTPRBP23467 1997 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 PRR14LQ5THK1 2151 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 FGF6P10767 208 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 AESQ08117 197 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 OR1C1Q15619 314 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 RTL8BQ17RB0 113 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 WDR82Q6UXN9 313 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 DMXL2Q8TDJ6 3036 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 CEP295Q9C0D2 2601 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 IGHV3-43A0A0B4J1X8 118 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 PSMB11A5LHX3 300 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 F2RL2O00254 374 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 IGHV3-43DP0DP04 118 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 HBBP68871 147 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 TMEM164Q5U3C3 297 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 TPRX1Q8N7U7 411 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
VPS9D1-201ENST00000389386 TRGV8A0A0C4DH27 118 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 DEFB108AA8MXU0 73 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 AGFG2O95081 481 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 MAGEA5P43359 124 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 RABAC1Q9UI14 185 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 SPCS1Q9Y6A9 102 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 A0A1W2PPM0 123 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 TAS2R45P59539 299 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 HSD52Q0P140 79 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 PERPQ96FX8 193 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 RTL8AQ9BWD3 113 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 POLDIP2Q9Y2S7 368 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 HILPDAQ9Y5L2 63 aa11.94□□□□□ -0.5
VPS9D1-201ENST00000389386 TEX48A0A1B0GUV7 120 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 MRPL33O75394 65 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 NBL1P41271 181 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 C7orf69Q9H7B7 122 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 CACNA1GO43497 2377 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 TMEM189A5PLL7 270 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 ZNF138P52744 262 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 RPL24P83731 157 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 THYN1Q9P016 225 aa11.93□□□□□ -0.5
VPS9D1-201ENST00000389386 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 FNDC10F2Z333 226 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 ERVK-16P61578 105 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 RFESDQ8TAC1 157 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 COQ2Q96H96 371 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 SLC25A33Q9BSK2 321 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 TMEM140Q9NV12 185 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 FAM87AP0C7U9 286 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 LINC00470Q9BZP3 86 aa11.92□□□□□ -0.5
VPS9D1-201ENST00000389386 NBEAQ8NFP9 2946 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 IGKV1OR2-108A0A075B7D4 117 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 TUSC5Q8IXB3 177 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 RAB37Q96AX2 223 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 NDFIP1Q9BT67 221 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 C19orf24Q9BVV8 132 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 FABP6P51161 128 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 GUSBP1Q15486 140 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 BOKQ9UMX3 212 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-201ENST00000389386 PEX7O00628 323 aa11.9□□□□□ -0.5
VPS9D1-201ENST00000389386 GPR12P47775 334 aa11.9□□□□□ -0.5
VPS9D1-201ENST00000389386 MOB3BQ86TA1 216 aa11.9□□□□□ -0.5
VPS9D1-201ENST00000389386 DPF1Q92782 380 aa11.9□□□□□ -0.5
VPS9D1-201ENST00000389386 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms