RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 GCSHP23434 173 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 TIMP3P35625 211 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 CFHR2P36980 270 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 SEC11AP67812 179 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 FAM106AQ4KMX7 169 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 IBA57Q5T440 356 aaKnown RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 SHISA5Q8N114 240 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 RAXQ9Y2V3 346 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 IGKV1D-43A0A0B4J1Z2 117 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 C1QTNF9BB2RNN3 333 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 C9JCJ5 164 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 HYPMO75409 117 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 OR5AL1P0C617 328 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 OTX1P32242 354 aaPredicted RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 DSCR4P56555 118 aaPredicted RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 KLRB1Q12918 225 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 UNQ5815/PRO19632Q6UWF5 114 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 VSIRQ9H7M9 311 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 MPC1Q9Y5U8 109 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 LAMA1P25391 3075 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 COL4A3Q01955 1670 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 LOC389332A0A1B0GUA5 103 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 ZNF883P0CG24 379 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 ZNF32P17041 273 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 OPRK1P41145 380 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 SSR4P51571 173 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 TMEM54Q969K7 222 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 GPR82Q96P67 336 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 SIGLEC12Q96PQ1 595 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 H7C1H1 209 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 HLA-DRB1P01911 266 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 ESDP10768 282 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 MORN2Q502X0 79 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 PSMG4Q5JS54 123 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 TMEM219Q86XT9 240 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 NKAPP1Q8N9T2 125 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 WFDC12Q8WWY7 111 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 CLEC7AQ9BXN2 247 aa4.77□□□□□ -1.65
RFC1-202ENST00000381897 KLF13Q9Y2Y9 288 aaPredicted RBP4.77□□□□□ -1.65
RFC1-202ENST00000381897 IGHV2OR16-5A0A0B4J2B6 119 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 IZUMO1RA6ND01 250 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 FOXI3A8MTJ6 420 aaPredicted RBP4.76□□□□□ -1.65
RFC1-202ENST00000381897 CDX4O14627 284 aaPredicted RBP4.76□□□□□ -1.65
RFC1-202ENST00000381897 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 C1QTNF9P0C862 333 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 LMO1P25800 156 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 GATA4P43694 442 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 CLEC19AQ6UXS0 136 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 SHISA6Q6ZSJ9 500 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 SLC22A18ASQ8N1D0 253 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 EPDR1Q9UM22 224 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 SPTY2D1-AS1A0A0U1RR47 76 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 ETV2O00321 342 aaPredicted RBP4.76□□□□□ -1.65
RFC1-202ENST00000381897 CLDN14O95500 239 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 TOMM40O96008 361 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 CRYGCP07315 174 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 RFPL3SP0C7P2 107 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 SRSF1Q07955 248 aaKnown RBP eCLIP4.76□□□□□ -1.65
RFC1-202ENST00000381897 TMEM97Q5BJF2 176 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 PAPPA-AS1Q5QFB9 102 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 ZNF645Q8N7E2 425 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 OR2M3Q8NG83 312 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 C19orf24Q9BVV8 132 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 GNB4Q9HAV0 340 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 NUP210Q8TEM1 1887 aaPredicted RBP4.76□□□□□ -1.65
RFC1-202ENST00000381897 APC2O95996 2303 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 TRGV10A0A0A0MS01 117 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 MLNRO43193 412 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 CD5LO43866 347 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 OR2H2O95918 312 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 GCHFRP30047 84 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 CKS2P33552 79 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 LYZL4Q96KX0 146 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 ZNF488Q96MN9 340 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 HS3ST6Q96QI5 342 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 LRRC61Q9BV99 259 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 NPVFQ9HCQ7 196 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 URB1O60287 2271 aaKnown RBP4.76□□□□□ -1.65
RFC1-202ENST00000381897 TRPM6Q9BX84 2022 aa4.76□□□□□ -1.65
RFC1-202ENST00000381897 ODAMA1E959 279 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 PRR19A6NJB7 356 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 SHISA9B4DS77 424 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 UPK2O00526 184 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 CCL25O15444 150 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 ATP5G3P48201 142 aa4.75□□□□□ -1.65
RFC1-202ENST00000381897 PSG5Q15238 335 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms