RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 COX7A1P24310 79 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 RPL8P62917 257 aaKnown RBP11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 VWC2Q2TAL6 325 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 ZNF343Q6P1L6 599 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 CENPVQ7Z7K6 275 aaPredicted RBP11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 P2RX4Q99571 388 aa11.16□□□□□ -0.62
TNFSF13-203ENST00000380535 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 MALRD1Q5VYJ5 2156 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 C15orf62A8K5M9 175 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 M0QZ24 198 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 MPDU1O75352 247 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 REG1BP48304 166 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 PAX2Q02962 417 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 KIAA0141Q14154 515 aaPredicted RBP11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 CFHR4Q92496 578 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 RAX2Q96IS3 184 aa11.15□□□□□ -0.62
TNFSF13-203ENST00000380535 MAP1LC3B2A6NCE7 125 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 IFNA1P01562 189 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 CXCL1P09341 107 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 MOB3BQ86TA1 216 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 MMD2Q8IY49 270 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 MAP1LC3BQ9GZQ8 125 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 C17orf112F2Z3M2 114 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 RNF152Q8N8N0 203 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 KCNIP2Q9NS61 270 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 VAX2Q9UIW0 290 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
TNFSF13-203ENST00000380535 YIF1AO95070 293 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 IGLV2-23P01705 113 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 NPY1RP25929 384 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 LGALS4P56470 323 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 ERHP84090 104 aaKnown RBP11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 VMO1Q7Z5L0 202 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 TMEM242Q9NWH2 141 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 TGIF2-C20orf24A0A0A6YYL0 155 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 MDKP21741 143 aaPredicted RBP11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 OR4C5Q8NGB2 326 aa11.13□□□□□ -0.63
TNFSF13-203ENST00000380535 HRNRQ86YZ3 2850 aaPredicted RBP11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 A0A1W2PPI3 338 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 TOX4O94842 621 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 SLC25A16P16260 332 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 ZFP36P26651 326 aaKnown RBP11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 UBE2E1P51965 193 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 SRSF1Q07955 248 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 TCTEX1D4Q5JR98 221 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 ZNF709Q8N972 641 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 SLC39A9Q9NUM3 307 aa11.12□□□□□ -0.63
TNFSF13-203ENST00000380535 M0QXV9 152 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 IGKV1D-33P01593 117 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 IGKV1-33P01594 117 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 RND2P52198 227 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 LCN2P80188 198 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 HCP5Q6MZN7 132 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 SRSF8Q9BRL6 282 aaKnown RBP11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 CLDN34H7C241 214 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 RRHO14718 337 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 ACTL6BO94805 426 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 MT-CO2P00403 227 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 CKS1BP61024 79 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 ACSM6Q6P461 480 aa11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 TSSC4Q9Y5U2 329 aaPredicted RBP11.11□□□□□ -0.63
TNFSF13-203ENST00000380535 CRYGBP07316 175 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 LDLRAD2Q5SZI1 272 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 NPCDR1Q9BY65 106 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 DOK5Q9P104 306 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 WDR83OSQ9Y284 106 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 CFAP46Q8IYW2 2715 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 TNCP24821 2201 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 TRAV30A0A087WSZ9 112 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 PRSS46E5RG02 174 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 PPP1R2P9O14990 202 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 RANP62826 216 aaKnown RBP11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 MEF2BQ02080 365 aaPredicted RBP11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 PSG5Q15238 335 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 TMEM170AQ8WVE7 144 aa11.1□□□□□ -0.63
TNFSF13-203ENST00000380535 ASCL2Q99929 193 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms