RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SLC25A20O43772 301 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 GNG5P63218 68 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 C17orf82Q86X59 251 aaPredicted RBP9.04□□□□□ -0.96
LINC00654-201ENST00000379053 FOXC2Q99958 501 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 CD5P06127 495 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 CTAG1AP78358 180 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 HEPN1Q6WQI6 88 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 GLRX5Q86SX6 157 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 FAM131CQ96AQ9 280 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 IGHV1-3A0A0C4DH29 117 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 M0R1W7 72 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 TBX6O95947 436 aaPredicted RBP9.04□□□□□ -0.96
LINC00654-201ENST00000379053 CBLN1P23435 193 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 KIR3DL3Q8N743 410 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 RAMP3O60896 148 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 GPR179Q6PRD1 2367 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 HEATR5BQ9P2D3 2071 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 SLC17A3O00476 420 aa9.04□□□□□ -0.96
LINC00654-201ENST00000379053 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
LINC00654-201ENST00000379053 PAQR4Q8N4S7 273 aaPredicted RBP9.04□□□□□ -0.96
LINC00654-201ENST00000379053 ADARB2-AS1A8MUL3 147 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 ATOH7Q8N100 152 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 A0A1B0GW15 77 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 VENTXO95231 258 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 CD8AP01732 235 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 COL8A2P25067 703 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 ATP5G3P48201 142 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 Q5BKY6 102 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 FAM110DQ8TAY7 271 aaPredicted RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 GTF3AQ92664 365 aaKnown RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 NEUROG1Q92886 237 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 NUDT11Q96G61 164 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 KLF2Q9Y5W3 355 aaPredicted RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 PRR32B1ATL7 298 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 MSMBP08118 114 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 FOXL1Q12952 345 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 DIDO1Q9BTC0 2240 aaKnown RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
LINC00654-201ENST00000379053 RCHY1Q96PM5 261 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 JKAMPQ9P055 326 aa9.03□□□□□ -0.96
LINC00654-201ENST00000379053 IGKV1-9A0A0C4DH69 117 aa9.02□□□□□ -0.96
LINC00654-201ENST00000379053 A6NNC1 897 aa9.02□□□□□ -0.96
LINC00654-201ENST00000379053 C10orf55Q5SWW7 151 aa9.02□□□□□ -0.96
LINC00654-201ENST00000379053 RTBDNQ9BSG5 229 aaPredicted RBP9.02□□□□□ -0.96
LINC00654-201ENST00000379053 LINC00587B1AMM8 73 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 MBNL3Q9NUK0 354 aaKnown RBP9.02□□□□□ -0.97
LINC00654-201ENST00000379053 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 EFNA2O43921 213 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 ARFGEF1Q9Y6D6 1849 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 PYYP10082 97 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 GFI1BQ5VTD9 330 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 SPSB3Q6PJ21 355 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 GHRHP01286 108 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 CRYGSP22914 178 aa9.02□□□□□ -0.97
LINC00654-201ENST00000379053 ZFC3H1O60293 1989 aaKnown RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 DPRXA6NFQ7 191 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 IGFBP3P17936 291 aaPredicted RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 CCL1P22362 96 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 PSG8Q9UQ74 426 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 TBL2Q9Y4P3 447 aaKnown RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 IGHG3P01860 377 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 CD28P10747 220 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 RPL15P61313 204 aaKnown RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 ZNF474Q6S9Z5 364 aaPredicted RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 UBE2E2Q96LR5 201 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 J3QLI3 93 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 NDUFA3O95167 84 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 C5orf64Q2M2E5 130 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 ZNF319Q9P2F9 582 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 ABCA1O95477 2261 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 SAA4P35542 130 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 FXYD7P58549 80 aa9.01□□□□□ -0.97
LINC00654-201ENST00000379053 PEF1Q9UBV8 284 aaKnown RBP9.01□□□□□ -0.97
LINC00654-201ENST00000379053 USMG5Q96IX5 58 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 PIKFYVEQ9Y2I7 2098 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 RNF5Q99942 180 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 EPDR1Q9UM22 224 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 NDPQ00604 133 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 TTC9CQ8N5M4 171 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 THADAQ6YHU6 1953 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 TAF1LQ8IZX4 1826 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 LMO1P25800 156 aa9□□□□□ -0.97
LINC00654-201ENST00000379053 MRPL16Q9NX20 251 aaKnown RBP9□□□□□ -0.97
LINC00654-201ENST00000379053 HIGD1CA8MV81 97 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms