RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 RPL39P5Q59GN2 51 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 RNF166Q96A37 237 aaPredicted RBP8.93□□□□□ -0.98
RTN3-206ENST00000377819 hADV29S1A0JD25 119 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 TCRAP04437 139 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 LY6G5BQ8NDX9 201 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 PPIFP30405 207 aaKnown RBP8.93□□□□□ -0.98
RTN3-206ENST00000377819 SRSF7Q16629 238 aaKnown RBP eCLIP8.93□□□□□ -0.98
RTN3-206ENST00000377819 ZAR1Q86SH2 424 aa8.93□□□□□ -0.98
RTN3-206ENST00000377819 SLC25A47Q6Q0C1 308 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 ZNF501Q96CX3 271 aaPredicted RBP8.92□□□□□ -0.98
RTN3-206ENST00000377819 C15orf61A6NNL5 157 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 HRKO00198 91 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 CD160O95971 181 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 DSCR9P59020 149 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 MIXL1Q9H2W2 232 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 SORL1Q92673 2214 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 A8MXK9 166 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 PSG1P11464 419 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 CRYBA2P53672 197 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 PRCDQ00LT1 54 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 MDS2Q8NDY4 140 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 SPANXDQ9BXN6 97 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 DEFB130BP0DP73 79 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 DEFB130AP0DP74 79 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 EVI2AP22794 236 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 CCL20P78556 96 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 RSPO3Q9BXY4 272 aaPredicted RBP8.92□□□□□ -0.98
RTN3-206ENST00000377819 LINC00312Q9Y6C7 94 aa8.92□□□□□ -0.98
RTN3-206ENST00000377819 TNFSF13O75888 250 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 IGHV3-53P01767 116 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 RPL34P49207 117 aaKnown RBP8.91□□□□□ -0.98
RTN3-206ENST00000377819 RBM3P98179 157 aaKnown RBP8.91□□□□□ -0.98
RTN3-206ENST00000377819 TRAV41A0A0B4J266 112 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 IRF3Q14653 427 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 SMRP1Q8NCR6 262 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 ZNF721Q8TF20 911 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 MYH4Q9Y623 1939 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 FCN3O75636 299 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
RTN3-206ENST00000377819 FAM27E3Q08E93 113 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 LAGE3Q14657 143 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 FAM216BQ8N7L0 139 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 Q96M66 194 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 FAM208BQ5VWN6 2430 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 PTPRFP10586 1907 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 C12orf77C9JDV5 145 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 CXCL2P19875 107 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 UBE2BP63146 152 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 EPDR1Q9UM22 224 aa8.91□□□□□ -0.98
RTN3-206ENST00000377819 FOXS1O43638 330 aa8.9□□□□□ -0.98
RTN3-206ENST00000377819 PSPNO60542 156 aa8.9□□□□□ -0.98
RTN3-206ENST00000377819 C1QTNF9P0C862 333 aa8.9□□□□□ -0.98
RTN3-206ENST00000377819 NANOS3P60323 173 aaKnown RBP8.9□□□□□ -0.98
RTN3-206ENST00000377819 TMEM190Q8WZ59 177 aa8.9□□□□□ -0.98
RTN3-206ENST00000377819 A0A1W2PRE2 83 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 CDKN1AP38936 164 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 BCL6BQ8N143 479 aaPredicted RBP8.9□□□□□ -0.99
RTN3-206ENST00000377819 TNFRSF14Q92956 283 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 OSTCQ9NRP0 149 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 KLHDC2Q9Y2U9 406 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 SERF1AO75920 110 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 FAM90A2PQ658T7 463 aa8.9□□□□□ -0.99
RTN3-206ENST00000377819 IGHV1-45A0A0A0MS14 117 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 RNASE6Q93091 150 aaKnown RBP8.89□□□□□ -0.99
RTN3-206ENST00000377819 GSN-AS1Q9NRJ2 163 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 USF3Q68DE3 2245 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 OTOFQ9HC10 1997 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 SRRM4A7MD48 611 aaKnown RBP8.89□□□□□ -0.99
RTN3-206ENST00000377819 C17orf100A8MU93 164 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 FAM90A9PA6NNJ1 464 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 C22orf46C9J442 243 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 F5H768 121 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 PRSS23O95084 383 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 SEC61GP60059 68 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 TEX38Q6PEX7 206 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 NEGR1Q7Z3B1 354 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 LINC01465Q8N7H1 131 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 NEUROG3Q9Y4Z2 214 aa8.89□□□□□ -0.99
RTN3-206ENST00000377819 TMEM187Q14656 261 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 ACP7Q6ZNF0 438 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 MIR17HGQ75NE6 70 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 SVIPQ8NHG7 77 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 FOXL1Q12952 345 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 SIGLEC15Q6ZMC9 328 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 CHCHD1Q96BP2 118 aaKnown RBP8.88□□□□□ -0.99
RTN3-206ENST00000377819 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 YBX2Q9Y2T7 364 aaKnown RBP8.88□□□□□ -0.99
RTN3-206ENST00000377819 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 A0A1W2PPI3 338 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 E9PQ18 207 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 UMODP07911 640 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 SP9P0CG40 484 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 FAM90A1Q86YD7 464 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 DSCR8Q96T75 97 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 SIP14410 1827 aa8.88□□□□□ -0.99
RTN3-206ENST00000377819 NDUFB1O75438 58 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms