RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 COX6B1P14854 86 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ARPC1AQ92747 370 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 FAM167A-AS1Q96KT0 104 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 CTDSP1Q9GZU7 261 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 DOK5Q9P104 306 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGHV4-30-2A0A087WSY4 118 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ELOA3CA0A087WX78 387 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 CRYBA1P05813 215 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 RPL23P62829 140 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 CX3CL1P78423 397 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 FLI1Q01543 452 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 C10orf113Q5VZT2 155 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 OR4X1Q8NH49 305 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 C11orf52Q96A22 123 aa14.26□□□□□ -0.13
HLA-DQB1-201ENST00000374943 NCBP2LA6PVI3 153 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 PLP1P60201 277 aa14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 PATE2Q6UY27 113 aa14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 PIP4P2Q8N4L2 257 aa14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 OR51G1Q8NGK1 321 aa14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 SLC25A2Q9BXI2 301 aa14.25□□□□□ -0.13
HLA-DQB1-201ENST00000374943 K7EIM0 57 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 OR7C2O60412 319 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ADIRFQ15847 76 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ASPHD1Q5U4P2 390 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 FAM24BQ8N5W8 94 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 Q8N9W7 124 aa14.24□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGLC1P0CG04 106 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 NDPQ00604 133 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 KIAA0141Q14154 515 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 TTC9CQ8N5M4 171 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 PERPQ96FX8 193 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 UHRF2Q96PU4 802 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 MLXQ9UH92 298 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGHV1-69DA0A0B4J2H0 117 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 NDUFB4O95168 129 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGHV1-69P01742 117 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 RAB5AP20339 215 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 FAM120AOSQ5T036 256 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 MORN5Q5VZ52 161 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 FAM103A1Q9BTL3 118 aaKnown RBP14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
HLA-DQB1-201ENST00000374943 SPG11Q96JI7 2443 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGLV11-55A0A075B6I3 123 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 IGHV7-81A0A0B4J1V7 117 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 SCO2A0A1W2PP80 73 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 A0A1W2PRE2 83 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 CLDN34H7C241 214 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ELOBQ15370 118 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 OR5AU1Q8NGC0 362 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ABCA1O95477 2261 aa14.22□□□□□ -0.13
HLA-DQB1-201ENST00000374943 LRRK2Q5S007 2527 aa14.21□□□□□ -0.13
HLA-DQB1-201ENST00000374943 UTP20O75691 2785 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-201ENST00000374943 ZNF48Q96MX3 618 aaPredicted RBP14.21□□□□□ -0.13
HLA-DQB1-201ENST00000374943 DERL1Q9BUN8 251 aa14.21□□□□□ -0.13
HLA-DQB1-201ENST00000374943 MSMBP08118 114 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 SLC25A16P16260 332 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 UBE2L3P68036 154 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 LINC00305Q7Z4B0 112 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 LINC01551Q86U37 167 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 STXBP6Q8NFX7 210 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 Q8WTZ3 238 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 FANCD2OSQ96PS1 177 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRAV5A0A0B4J249 113 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 HYPMO75409 117 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 FABP1P07148 127 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 RBM14Q96PK6 669 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 RASL11BQ9BPW5 248 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 PAXXQ9BUH6 204 aa14.2□□□□□ -0.14
HLA-DQB1-201ENST00000374943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 IGKV1-17P01599 117 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 OR10J4P0C629 311 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 CD99P14209 185 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 KLK9Q2XQG4 91 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 ZNF343Q6P1L6 599 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 OR1B1Q8NGR6 318 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 NRGNQ92686 78 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 ANAPC16Q96DE5 110 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 OR51M1Q9H341 326 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 KLK9Q9UKQ9 250 aa14.19□□□□□ -0.14
HLA-DQB1-201ENST00000374943 ANKRD17O75179 2603 aaKnown RBP14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRBV20OR9-2A0A075B6H5 130 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TRAV40A0A0B4J280 105 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C1orf196B1AJZ1 125 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 GGTLC3B5MD39 225 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C9JCJ5 164 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 ORM2P19652 201 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 RAB5BP61020 215 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C16orf82Q7Z2V1 217 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 C1QL4Q86Z23 238 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 MEGF9Q9H1U4 602 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 GSX1Q9H4S2 264 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 LY96Q9Y6Y9 160 aa14.18□□□□□ -0.14
HLA-DQB1-201ENST00000374943 B4DSR2 109 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 PSG1P11464 419 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 TIGITQ495A1 244 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 SGMS2Q8NHU3 365 aa14.17□□□□□ -0.14
HLA-DQB1-201ENST00000374943 FXYD5Q96DB9 178 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms