RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ZNF79Q15937 498 aa8.23□□□□□ -1.09
HDAC8-204ENST00000373560 KCTD21Q4G0X4 260 aa8.23□□□□□ -1.09
HDAC8-204ENST00000373560 NANOGP1Q8N7R0 232 aa8.23□□□□□ -1.09
HDAC8-204ENST00000373560 OR56B1Q8NGI3 324 aa8.23□□□□□ -1.09
HDAC8-204ENST00000373560 FAM212BQ9NTI7 297 aaPredicted RBP8.23□□□□□ -1.09
HDAC8-204ENST00000373560 LPAP08519 4548 aa8.23□□□□□ -1.09
HDAC8-204ENST00000373560 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 SIVA1O15304 175 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 RORCP51449 518 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 Q6ZS49 121 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 RAB3CQ96E17 227 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 SCN3BQ9NY72 215 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 BLOC1S6Q9UL45 172 aa8.22□□□□□ -1.09
HDAC8-204ENST00000373560 TMEM272A0A1B0GTI8 110 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 ZNF701M0R085 212 aaPredicted RBP8.21□□□□□ -1.1
HDAC8-204ENST00000373560 SLC17A2O00624 439 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 RBFOX2O43251 390 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC8-204ENST00000373560 SLC22A5O76082 557 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 HPRT1P00492 218 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 FGF2P09038 288 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 PTHLHP12272 177 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 SSX1Q16384 188 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 SCXQ7RTU7 201 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 OR51H1Q8NH63 302 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 SECTM1Q8WVN6 248 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 CNBD2Q96M20 576 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.1
HDAC8-204ENST00000373560 NRN1Q9NPD7 142 aa8.21□□□□□ -1.1
HDAC8-204ENST00000373560 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 CRXO43186 299 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-204ENST00000373560 NXPH4O95158 308 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 HIST1H1DP16402 221 aaKnown RBP8.2□□□□□ -1.1
HDAC8-204ENST00000373560 ELK1P19419 428 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 M6PRP20645 277 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 MAPK3P27361 379 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-204ENST00000373560 PSG9Q00887 426 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 FOXI2Q6ZQN5 318 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 PHYHIPQ92561 330 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 LINC00052Q96N35 136 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 TMEM208Q9BTX3 173 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 MND1Q9BWT6 205 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 DUSP21Q9H596 190 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 PLGRKTQ9HBL7 147 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 LSM2Q9Y333 95 aaKnown RBP8.2□□□□□ -1.1
HDAC8-204ENST00000373560 TPRKBQ9Y3C4 175 aa8.2□□□□□ -1.1
HDAC8-204ENST00000373560 A0A096LPF7 62 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 MARCH11A6NNE9 402 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 RGS10O43665 173 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 TNFAIP8O95379 198 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 CD1AP06126 327 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 NPBWR1P48145 328 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 SPHARQ15513 63 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 C2orf76Q3KRA6 126 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 TIGITQ495A1 244 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 NFE4Q86UQ8 179 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 CADM3Q8N126 398 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 IGF2BP2-AS1Q96M15 143 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
HDAC8-204ENST00000373560 MUC2Q02817 5179 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 M0R2Z0 102 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 G6PCP35575 357 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 PAX9P55771 341 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 RAB11BQ15907 218 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 BAP18Q8IXM2 172 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 OR10R2Q8NGX6 335 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-204ENST00000373560 FAM3DQ96BQ1 224 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 DAZAP1Q96EP5 407 aaKnown RBP8.18□□□□□ -1.1
HDAC8-204ENST00000373560 AIFM2Q9BRQ8 373 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 CCDC90BQ9GZT6 254 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 PLEKHA2Q9HB19 425 aa8.18□□□□□ -1.1
HDAC8-204ENST00000373560 SEPSECSQ9HD40 501 aaKnown RBP8.18□□□□□ -1.1
HDAC8-204ENST00000373560 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
HDAC8-204ENST00000373560 SOCS3O14543 225 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 C1QBP02746 253 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 HOXA1P49639 335 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-204ENST00000373560 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 PRSS48Q7RTY5 328 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 Q8N814 137 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 VSIG2Q96IQ7 327 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 TMEM56Q96MV1 263 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 SCPEP1Q9HB40 452 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
HDAC8-204ENST00000373560 A0A0J9YX75 114 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 A8MTW9 85 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 KRASP01116 189 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC8-204ENST00000373560 HSMCR30P0CW71 290 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 TSPOP30536 169 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 TALDO1P37837 337 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 EIF2B2P49770 351 aaKnown RBP8.16□□□□□ -1.1
HDAC8-204ENST00000373560 GABARAPL2P60520 117 aa8.16□□□□□ -1.1
HDAC8-204ENST00000373560 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms