RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PVRIGQ6DKI7 326 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 FAM169BQ8N8A8 192 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 ARPC1AQ92747 370 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 RNF125Q96EQ8 232 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 C17orf100A8MU93 164 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 CEACAM4O75871 244 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 DPM2O94777 84 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 NXT2Q9NPJ8 142 aaKnown RBP14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 LY96Q9Y6Y9 160 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 PSPNO60542 156 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 PPBPP02775 128 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 RIPPLY3P57055 190 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 GGNQ86UU5 652 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 RASL11AQ6T310 242 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 MRPL52Q86TS9 123 aaKnown RBP14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 TSPAN13O95857 204 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 LTBRP36941 435 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 LCN12Q6JVE5 192 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 SLX1AQ9BQ83 275 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 VCX2Q9H322 139 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 A0A0G2JRQ6 117 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 LY6EQ16553 131 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 OR10W1Q8NGF6 305 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 ASCL2Q99929 193 aa14.19□□□□□ -0.14
PTP4A1-201ENST00000370651 IGHV3OR16-12A0A075B7B8 117 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 TRBV6-6A0A0A6YYG2 114 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 IGKV3-20P01619 116 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 TRGV3P03979 118 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 SNRPD3P62318 126 aaKnown RBP14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 MRAP2Q96G30 205 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 LRRK1Q38SD2 2015 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 PINLYPA6NC86 204 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 A8MWP6 167 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 Q6ZS49 121 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 PPP1R27Q86WC6 154 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 BMPERQ8N8U9 685 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 RSPO3Q9BXY4 272 aaPredicted RBP14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 EREGO14944 169 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 TGFAP01135 160 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 RAX2Q96IS3 184 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 KIAA2026Q5HYC2 2103 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 DNAL4O96015 105 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 SEMA5BQ9P283 1151 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 ROS1P08922 2347 aa14.18□□□□□ -0.14
PTP4A1-201ENST00000370651 ZNF585BQ52M93 769 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 BSPH1Q075Z2 132 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 FOXH1O75593 365 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 TDGF1P3P51864 188 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 SUMO2P61956 95 aaKnown RBP14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 KLRB1Q12918 225 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 Q6ZRM9 215 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 H7C1H1 209 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 UCNP55089 124 aa14.17□□□□□ -0.14
PTP4A1-201ENST00000370651 SP9P0CG40 484 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 RRN3P1Q2M238 152 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 SLC25A48Q6ZT89 311 aaKnown RBP14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 VKORC1Q9BQB6 163 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 OR9G4Q8NGQ1 327 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 SIGMAR1Q99720 223 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 DMRTA2Q96SC8 542 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 ZNF883P0CG24 379 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 C10orf91Q5T1B1 145 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 C8orf46Q8TAG6 207 aa14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 PHF3Q92576 2039 aaKnown RBP14.16□□□□□ -0.14
PTP4A1-201ENST00000370651 NBR2O15453 112 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 Q5PR19 223 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 CASP8AP2Q9UKL3 1982 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 SRRM5B3KS81 715 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 PLAURQ03405 335 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 FAM71F2Q6NXP2 309 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 LINC01560Q8TB33 94 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 ZNF479Q96JC4 524 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 TMEM133Q9H2Q1 129 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 MRPL27Q9P0M9 148 aaKnown RBP14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 IGHV2-70P01814 119 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 NTF4P34130 210 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 MPV17L2Q567V2 206 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 SAMD5Q5TGI4 173 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 RPUSD1Q9UJJ7 312 aaKnown RBP14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 MRPS16Q9Y3D3 137 aaKnown RBP14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 UBE2V1Q13404 147 aa14.15□□□□□ -0.14
PTP4A1-201ENST00000370651 NPFFO15130 113 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 IGKCP01834 107 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 SRSF1Q07955 248 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 CLEC19AQ6UXS0 136 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 C17orf82Q86X59 251 aaPredicted RBP14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 MOB4Q9Y3A3 225 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 PFN1P07737 140 aaKnown RBP14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 SLC50A1Q9BRV3 221 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 TRAV3A0A0B4J244 114 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 C15orf62A8K5M9 175 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 ERVK11-1P61568 191 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 C10orf55Q5SWW7 151 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 ASCL4Q6XD76 172 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 TNFRSF18Q9Y5U5 241 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 hDV102S1A0JD36 115 aa14.14□□□□□ -0.15
PTP4A1-201ENST00000370651 PSMB11A5LHX3 300 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms