RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SLC16A13Q7RTY0 426 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 TMEM170AQ8WVE7 144 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 S100ZQ8WXG8 99 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 CCDC32Q9BV29 185 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 SELENOKQ9Y6D0 94 aa7.4□□□□□ -1.22
CD48-202ENST00000368046 COL7A1Q02388 2944 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 SORL1Q92673 2214 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 CHEK1O14757 476 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 TSPAN4O14817 238 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 LYRM1O43325 122 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 ZNF207O43670 478 aaKnown RBP7.39□□□□□ -1.23
CD48-202ENST00000368046 MED6O75586 246 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
CD48-202ENST00000368046 GGNBP1Q5YKI7 109 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 PRSS54Q6PEW0 395 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 LINC00322Q6ZN03 302 aaPredicted RBP7.39□□□□□ -1.23
CD48-202ENST00000368046 LYG2Q86SG7 212 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 OR52B4Q8NGK2 314 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 COQ8AQ8NI60 647 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 GINS3Q9BRX5 216 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 RHPN1-AS1Q9BWJ2 59 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 BATF3Q9NR55 127 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 MRPL36Q9P0J6 103 aaKnown RBP7.39□□□□□ -1.23
CD48-202ENST00000368046 PUS1Q9Y606 427 aaKnown RBP eCLIP7.39□□□□□ -1.23
CD48-202ENST00000368046 U3KQK5 164 aa7.39□□□□□ -1.23
CD48-202ENST00000368046 SYNGR2O43760 224 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 ADAP1O75689 374 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 IFNA21P01568 189 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 TCRBP04435 133 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 IFNA4P05014 189 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 CD5P06127 495 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 ANXA7P20073 488 aaKnown RBP7.38□□□□□ -1.23
CD48-202ENST00000368046 NPPCP23582 126 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 GPX4P36969 197 aaPredicted RBP7.38□□□□□ -1.23
CD48-202ENST00000368046 ID3Q02535 119 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 DHRS2Q13268 280 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 C4orf46Q504U0 113 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 DEFB125Q8N687 156 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 Q8WTZ3 238 aa7.38□□□□□ -1.23
CD48-202ENST00000368046 CIB3Q96Q77 187 aaPredicted RBP7.38□□□□□ -1.23
CD48-202ENST00000368046 SPAG8Q99932 426 aaPredicted RBP7.38□□□□□ -1.23
CD48-202ENST00000368046 A0A1W2PS18 150 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 IGKV1-17P01599 117 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 IGLC1P0CG04 106 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 BMI1P35226 326 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 RND2P52198 227 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 YPEL3P61236 119 aaPredicted RBP7.37□□□□□ -1.23
CD48-202ENST00000368046 RAB11AP62491 216 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 RPP30P78346 268 aaKnown RBP7.37□□□□□ -1.23
CD48-202ENST00000368046 HAGHQ16775 308 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 TIGITQ495A1 244 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 FAM90A2PQ658T7 463 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 OR1S2Q8NGQ3 325 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 MITD1Q8WV92 249 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 NPIPB3Q92617 1050 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 RNF2Q99496 336 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 TM2D3Q9BRN9 247 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 PTTG2Q9NZH5 202 aa7.37□□□□□ -1.23
CD48-202ENST00000368046 IGHV3-49A0A0A0MS15 119 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 OR4C46A6NHA9 309 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 WRBO00258 174 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 APOHP02749 345 aaPredicted RBP7.36□□□□□ -1.23
CD48-202ENST00000368046 IAPPP10997 89 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 OR10J1P30954 320 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 CMC4P56277 68 aaPredicted RBP7.36□□□□□ -1.23
CD48-202ENST00000368046 PAFAH1B2P68402 229 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 ZNF846Q147U1 533 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 ACY3Q96HD9 319 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 MAGT1Q9H0U3 335 aa7.36□□□□□ -1.23
CD48-202ENST00000368046 IGHV3OR16-13A0A075B7E8 117 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 IGHV3-74A0A0B4J1X5 117 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 FAM240BA0A1B0GVZ2 78 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 RBMY1BA6NDE4 496 aaKnown RBP7.35□□□□□ -1.23
CD48-202ENST00000368046 RBMY1EA6NEQ0 496 aaKnown RBP7.35□□□□□ -1.23
CD48-202ENST00000368046 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 RBMY1DP0C7P1 496 aaKnown RBP7.35□□□□□ -1.23
CD48-202ENST00000368046 RD3LP0DJH9 198 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 CRYBB3P26998 211 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 NKX2-1P43699 371 aaPredicted RBP7.35□□□□□ -1.23
CD48-202ENST00000368046 GAMTQ14353 236 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 LILRB2Q8N423 598 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 OR4D5Q8NGN0 318 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 ST8SIA2Q92186 375 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 RCHY1Q96PM5 261 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 METTL26Q96S19 204 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 WDR12Q9GZL7 423 aaKnown RBP7.35□□□□□ -1.23
CD48-202ENST00000368046 WFDC10AQ9H1F0 79 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 C20orf85Q9H1P6 137 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 TMEM231Q9H6L2 316 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 SRD5A3Q9H8P0 318 aa7.35□□□□□ -1.23
CD48-202ENST00000368046 TRAV6A0A075B6T7 132 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms