RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ESRGQ1W209 222 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 OR4C16Q8NGL9 310 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 CYGBQ8WWM9 190 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 UFD1Q92890 307 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 TSC22D3Q99576 134 aa10.05□□□□□ -0.8
VAMP4-202ENST00000367740 FNDC4Q9H6D8 234 aaPredicted RBP10.05□□□□□ -0.8
VAMP4-202ENST00000367740 IFITM5A6NNB3 132 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 RORCP51449 518 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 GNG2P59768 71 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 PSG9Q00887 426 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 TIGITQ495A1 244 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 SIGLEC15Q6ZMC9 328 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 DEFB104AQ8WTQ1 72 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 SCPEP1Q9HB40 452 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 PLCXD1Q9NUJ7 323 aa10.04□□□□□ -0.8
VAMP4-202ENST00000367740 LRP2P98164 4655 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 CBY3A6NI87 242 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 ZNF705GA8MUZ8 300 aaPredicted RBP10.03□□□□□ -0.8
VAMP4-202ENST00000367740 M0QYG6 137 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 ATP8B1O43520 1251 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 ERHP84090 104 aaKnown RBP10.03□□□□□ -0.8
VAMP4-202ENST00000367740 FABP5Q01469 135 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 SPINK9Q5DT21 86 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 OR4X1Q8NH49 305 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 TMEM208Q9BTX3 173 aa10.03□□□□□ -0.8
VAMP4-202ENST00000367740 F6UB75 175 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 PGLYRP1O75594 196 aaPredicted RBP10.02□□□□□ -0.81
VAMP4-202ENST00000367740 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
VAMP4-202ENST00000367740 RASSF2P50749 326 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 FAM78BQ5VT40 261 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 TSPAN14Q8NG11 270 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 FCGR1BQ92637 280 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
VAMP4-202ENST00000367740 LINC00052Q96N35 136 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 WDR12Q9GZL7 423 aaKnown RBP10.02□□□□□ -0.81
VAMP4-202ENST00000367740 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
VAMP4-202ENST00000367740 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 BUB3O43684 328 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 TSPOP30536 169 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 PAX9P55771 341 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 HSPE1P61604 102 aaKnown RBP10.01□□□□□ -0.81
VAMP4-202ENST00000367740 TRAM1Q15629 374 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 MLANAQ16655 118 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 PQLC1Q8N2U9 271 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 RXFP4Q8TDU9 374 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 IGF2BP2-AS1Q96M15 143 aa10.01□□□□□ -0.81
VAMP4-202ENST00000367740 EBAG9O00559 213 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 SCGB2A1O75556 95 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 GNAO1P09471 354 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 PSMA1P25786 263 aaKnown RBP10□□□□□ -0.81
VAMP4-202ENST00000367740 OPRK1P41145 380 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 SPATA31B1PQ5VZV4 182 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 OR4A16Q8NH70 328 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 SEC22AQ96IW7 307 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 CCDC90BQ9GZT6 254 aa10□□□□□ -0.81
VAMP4-202ENST00000367740 A0A0J9YX75 114 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 A0A0J9YY99 117 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 CORTO00230 105 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 SOCS3O14543 225 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 PDCD5O14737 125 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 CASQ2O14958 399 aaPredicted RBP9.99□□□□□ -0.81
VAMP4-202ENST00000367740 RNASE2P10153 161 aaKnown RBP9.99□□□□□ -0.81
VAMP4-202ENST00000367740 AZU1P20160 251 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 SNCAP37840 140 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 PSMB3P49720 205 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 AMTNQ6UX39 209 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 BORCS5Q969J3 196 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 DAPK2Q9UIK4 370 aa9.99□□□□□ -0.81
VAMP4-202ENST00000367740 A8MTW9 85 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 FCER2P06734 321 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 P0C879 139 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 IGLC1P0CG04 106 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 HSMCR30P0CW71 290 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 M6PRP20645 277 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 HERV-K104P61576 105 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 DHODHQ02127 395 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 OR5I1Q13606 314 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 COQ8AQ8NI60 647 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 RNF125Q96EQ8 232 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 ABHD1Q96SE0 405 aa9.98□□□□□ -0.81
VAMP4-202ENST00000367740 TRAV30A0A087WSZ9 112 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 TRAV1-2A0A0B4J238 106 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 CRXO43186 299 aaPredicted RBP9.97□□□□□ -0.81
VAMP4-202ENST00000367740 OXTP01178 125 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 IGKV1-39P01597 117 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 IGKV1D-39P04432 117 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 IL4P05112 153 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 EBLN2Q6P2I7 272 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 H2BFWTQ7Z2G1 175 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 C8orf59Q8N0T1 100 aaPredicted RBP9.97□□□□□ -0.81
VAMP4-202ENST00000367740 Q8WTZ3 238 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 GPR146Q96CH1 333 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 KRTAP4-12Q9BQ66 201 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 FAM30AQ9NZY2 134 aa9.97□□□□□ -0.81
VAMP4-202ENST00000367740 PKHD1L1Q86WI1 4243 aa9.96□□□□□ -0.81
VAMP4-202ENST00000367740 ZNF701M0R085 212 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms