RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 OR2J2O76002 312 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 PROSCO94903 275 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 UBL3O95164 117 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 LYPLA2O95372 231 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 SERPINA6P08185 405 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 RPS17P08708 135 aaKnown RBP0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 RBP1P09455 135 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 BAALC-AS2P0C853 105 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 FAM236CP0DP71 79 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 MIFP14174 115 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 OMPP47874 163 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 CEBPGP53567 150 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 RHOGP84095 191 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 PDE6HQ13956 83 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 IMPG1Q17R60 797 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 ACOT6Q3I5F7 207 aaPredicted RBP0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 TRAPPC5Q8IUR0 188 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 LINC00301Q8NCQ3 95 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 ZNF418Q8TF45 676 aaPredicted RBP0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 SFT2D1Q8WV19 159 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 C8orf76Q96K31 380 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 PARD6GQ9BYG4 376 aaPredicted RBP0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 CCDC90BQ9GZT6 254 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 OR51V1Q9H2C8 321 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 RASL12Q9NYN1 266 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 VPS29Q9UBQ0 182 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 SLC35A3Q9Y2D2 325 aa0.28□□□□□ -2.36
RNU4-48P-201ENST00000365559 PIK3C2GO75747 1445 aa0.28□□□□□ -2.37
RNU4-48P-201ENST00000365559 NCOA1Q15788 1441 aa0.28□□□□□ -2.37
RNU4-48P-201ENST00000365559 CITO14578 2027 aa0.28□□□□□ -2.37
RNU4-48P-201ENST00000365559 SPTBP11277 2137 aa0.28□□□□□ -2.37
RNU4-48P-201ENST00000365559 UNC13CQ8NB66 2214 aa0.28□□□□□ -2.37
RNU4-48P-201ENST00000365559 RIMBP3CA6NJZ7 1639 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 RIMBP3BA6NNM3 1639 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 RIMBP3Q9UFD9 1639 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 hCG_1818297A0A087WSY0 165 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 A0A087X0T9 212 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 TRAV12-1A0A0B4J245 112 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 hADV38S2A0JD32 116 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 C7orf71A4D174 169 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 A8MT66 165 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 NIPSNAP2O75323 286 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 RPP14O95059 124 aaKnown RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CNIH1O95406 144 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 TTRP02766 147 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR4E1P0C645 316 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 SMIM10L2AP0DMW4 78 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 SMIM10L2BP0DMW5 78 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CASP1P29466 404 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 YPEL3P61236 119 aaPredicted RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 RHOBP62745 196 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 BRMS1LQ5PSV4 323 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 GDF5OSQ5U4N7 250 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 Q8N814 137 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 GDPD1Q8N9F7 314 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR52R1Q8NGF1 315 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR13D1Q8NGV5 346 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CT55Q8WUE5 264 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 LINC00526Q96FQ7 95 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 ARL5BQ96KC2 179 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 C6orf62Q9GZU0 229 aaPredicted RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 DCSTAMPQ9H295 470 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CDC42SE1Q9NRR8 79 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 ACER3Q9NUN7 267 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 NHP2Q9NX24 153 aaKnown RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 MRPL27Q9P0M9 148 aaKnown RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CYSLTR1Q9Y271 337 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 NOSIPQ9Y314 301 aaKnown RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 RTL1A6NKG5 1358 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 ROBO3Q96MS0 1386 aa0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 PHRF1Q9P1Y6 1649 aaKnown RBP0.27□□□□□ -2.37
RNU4-48P-201ENST00000365559 CCDC160A6NGH7 325 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 SMIM9A6NGZ8 99 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ZNF736B4DX44 427 aaPredicted RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 CLDN25C9JDP6 229 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 KPNA3O00505 521 aaPredicted RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 LYZL6O75951 148 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 DNAL4O96015 105 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 SMIM17P0DL12 118 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 PPIBP23284 216 aaKnown RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ANP32AP39687 249 aaKnown RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 DEFA3P59666 94 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 AESQ08117 197 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ITGB3BPQ13352 177 aaPredicted RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 TSNQ15631 228 aaKnown RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ESRGQ1W209 222 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 DEFB113Q30KQ7 82 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C12orf74Q32Q52 190 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 LINC01554Q52M75 96 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C1orf137Q5JT78 98 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 TEX261Q6UWH6 196 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 SBSPONQ8IVN8 264 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 CLECL1Q8IZS7 167 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR6V1Q8N148 313 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 Q8N6K4 173 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 OTUD6BQ8N6M0 293 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C3orf56Q8N813 242 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR51A2Q8NGJ7 313 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR2T10Q8NGZ9 312 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR10J5Q8NHC4 309 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms