RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 KNTC1P50748 2209 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 TRAV21A0A0B4J279 112 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 NPIPB5A8MRT5 1133 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 CD28P10747 220 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 EFNB3Q15768 340 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 EXOC3-AS1Q8N2X6 119 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 FAM89BQ8N5H3 189 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 NEUROG1Q92886 237 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
CTNND1-203ENST00000361391 LINC00205P59089 165 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 NDPQ00604 133 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 TMEM133Q9H2Q1 129 aa6.69□□□□□ -1.34
CTNND1-203ENST00000361391 RBMY1BA6NDE4 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 RBMY1EA6NEQ0 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 RBMY1DP0C7P1 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 E9PQ18 207 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 LYPD3O95274 346 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 PEMTQ9UBM1 199 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 PSG8Q9UQ74 426 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 BRCA1P38398 1863 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 C5orf63A6NC05 138 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 CXCL1P09341 107 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 RNF144BQ7Z419 303 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 TMEM170AQ8WVE7 144 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 KLHDC3Q9BQ90 382 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 ZNF581Q9P0T4 197 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 LAMTOR2Q9Y2Q5 125 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 A0A087WWC5 75 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 THBDP07204 575 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 PAX1P15863 534 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 BMPERQ8N8U9 685 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 OR9G4Q8NGQ1 327 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 IGKV1-12A0A0C4DH73 117 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 IGKV1D-12P01611 117 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 TIMP3P35625 211 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 IFI27P40305 119 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 NXT2Q9NPJ8 142 aaKnown RBP6.68□□□□□ -1.34
CTNND1-203ENST00000361391 NEUROG3Q9Y4Z2 214 aa6.68□□□□□ -1.34
CTNND1-203ENST00000361391 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 VMO1Q7Z5L0 202 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 TMEM144Q7Z5S9 345 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 YPEL1O60688 119 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BKO60814 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 IGHV1-46P01743 117 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BJP06899 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 CEACAM1P13688 526 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BOP23527 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BBP33778 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BDP58876 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BCP62807 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST2H2BEQ16778 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BHQ93079 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 YPEL2Q96QA6 119 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BNQ99877 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 HIST1H2BMQ99879 126 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 PRDM13Q9H4Q3 707 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 ZNF474Q6S9Z5 364 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-203ENST00000361391 IGKV1-27A0A075B6S5 117 aa6.67□□□□□ -1.34
CTNND1-203ENST00000361391 MCRIP2Q9BUT9 160 aaKnown RBP6.67□□□□□ -1.34
CTNND1-203ENST00000361391 RPUSD1Q9UJJ7 312 aaKnown RBP6.67□□□□□ -1.34
CTNND1-203ENST00000361391 ZNF688P0C7X2 276 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 CEACAM8P31997 349 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 SRSF6Q13247 344 aaKnown RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 SIGLEC15Q6ZMC9 328 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 CACNG8Q8WXS5 425 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 DPM2O94777 84 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 IGKCP01834 107 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 HBDP02042 147 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 DUTP33316 252 aaKnown RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 SRSF1Q07955 248 aaKnown RBP eCLIP6.66□□□□□ -1.341e-7■□□□□ 10.7
CTNND1-203ENST00000361391 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 SAMD13Q5VXD3 122 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 BRD3OSQ6XYD6 125 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 F8VVB4 439 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 F8VWA3 439 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 C1orf122Q6ZSJ8 110 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 TCRAP04437 139 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 RPL35AP18077 110 aaKnown RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 RALGAPA2Q2PPJ7 1873 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-203ENST00000361391 FAM166AQ6J272 317 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 Q8TAT8 98 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 ZMAT4Q9H898 229 aa6.66□□□□□ -1.34
CTNND1-203ENST00000361391 NDUFS8O00217 210 aa6.65□□□□□ -1.34
CTNND1-203ENST00000361391 EFNA2O43921 213 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms