RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 COQ2Q96H96 371 aa11.08□□□□□ -0.63
LDB3-202ENST00000361373 TSC2P49815 1807 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 H0YJW9 148 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 CIDEAO60543 219 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 EFNB3Q15768 340 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 NMSQ5H8A3 153 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 PROK2Q9HC23 129 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 A8MXK9 166 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 CDX1P47902 265 aaPredicted RBP11.08□□□□□ -0.64
LDB3-202ENST00000361373 KIAA1644Q3SXP7 199 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 POLEQ07864 2286 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 TTC28Q96AY4 2481 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 TRBV7-1A0A0A6YYK4 115 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 PRSS33Q8NF86 280 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 TRGV9Q99603 122 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 PMCHL2Q9BQD1 86 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
LDB3-202ENST00000361373 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
LDB3-202ENST00000361373 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 H3BUX3 64 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 PRB3Q04118 309 aaPredicted RBP11.07□□□□□ -0.64
LDB3-202ENST00000361373 UQCR10Q9UDW1 63 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 C15orf32Q32M92 178 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
LDB3-202ENST00000361373 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
LDB3-202ENST00000361373 TREML4Q6UXN2 200 aa11.07□□□□□ -0.64
LDB3-202ENST00000361373 PTPRDP23468 1912 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 C5orf63A6NC05 138 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 LILRA1O75019 489 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 CD55P08174 381 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 COL8A2P25067 703 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 SLC25A34Q6PIV7 304 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 ORMDL3Q8N138 153 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
LDB3-202ENST00000361373 WDR81Q562E7 1941 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 TRGV2A0A075B6R0 118 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 CBLN1P23435 193 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
LDB3-202ENST00000361373 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
LDB3-202ENST00000361373 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 PSG8Q9UQ74 426 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 LMO1P25800 156 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 CACNG7P62955 275 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 SUPT4H1P63272 117 aaKnown RBP11.06□□□□□ -0.64
LDB3-202ENST00000361373 PKDREJQ9NTG1 2253 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 TNFSF13O75888 250 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 COL5A1-AS1Q5SY13 56 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 BEND2Q8NDZ0 799 aa11.06□□□□□ -0.64
LDB3-202ENST00000361373 F11RQ9Y624 299 aaKnown RBP11.06□□□□□ -0.64
LDB3-202ENST00000361373 A6NNC1 897 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 TMEM14EPQ6UXP3 125 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 NLRC5Q86WI3 1866 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 SIGLEC9Q9Y336 463 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 ZNF98A6NK75 572 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 PPBPP02775 128 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 SIGLEC15Q6ZMC9 328 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 FGF16O43320 207 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 TRAV1-1A0A0B4J248 108 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 SPATA45Q537H7 98 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 KLK15Q9H2R5 256 aa11.05□□□□□ -0.64
LDB3-202ENST00000361373 FAM223BA6NKX1 122 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 IGKV1-5P01602 117 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 PRSS2P07478 247 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 KLRD1Q13241 179 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 SLC17A3O00476 420 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
LDB3-202ENST00000361373 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
LDB3-202ENST00000361373 RPL23P62829 140 aaKnown RBP11.04□□□□□ -0.64
LDB3-202ENST00000361373 DOPEY2Q9Y3R5 2298 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 MSMBP08118 114 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 C10orf55Q5SWW7 151 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 GBF1Q92538 1859 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 PLXNA4Q9HCM2 1894 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 UBE2E1P51965 193 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 PRR30Q53SZ7 412 aaPredicted RBP11.04□□□□□ -0.64
LDB3-202ENST00000361373 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 TMEM183AQ8IXX5 376 aa11.04□□□□□ -0.64
LDB3-202ENST00000361373 LINC01549A6NIU2 74 aa11.03□□□□□ -0.64
LDB3-202ENST00000361373 F2Z2F3 143 aa11.03□□□□□ -0.64
LDB3-202ENST00000361373 PLAURQ03405 335 aa11.03□□□□□ -0.64
LDB3-202ENST00000361373 ZNF585BQ52M93 769 aa11.03□□□□□ -0.64
LDB3-202ENST00000361373 SCN8AQ9UQD0 1980 aa11.03□□□□□ -0.64
LDB3-202ENST00000361373 CD7P09564 240 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms