RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TRBV20-1A0A075B6N2 111 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 UBE2V1Q13404 147 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 DPM3Q9P2X0 92 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 C1QAP02745 245 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 CCL4P13236 92 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 FAM219BQ5XKK7 198 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 NEGR1Q7Z3B1 354 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 ZIC4Q8N9L1 334 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 DUSP15Q9H1R2 295 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-203ENST00000360280 NEUROG3Q9Y4Z2 214 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 COL24A1Q17RW2 1714 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 TMEM144Q7Z5S9 345 aa7.82□□□□□ -1.16
VPS13A-203ENST00000360280 GTF3AQ92664 365 aaKnown RBP7.82□□□□□ -1.16
VPS13A-203ENST00000360280 LINC00312Q9Y6C7 94 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 ZNF407Q9C0G0 2248 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-49A0A0A0MS15 119 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-35A0A0C4DH35 117 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 RASL10AQ92737 203 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 LHX2P50458 406 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TEX43Q6ZNM6 134 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TIMP3P35625 211 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 ZNF501Q96CX3 271 aaPredicted RBP7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TMEM258P61165 79 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 NPC2P61916 151 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 CLEC19AQ6UXS0 136 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 ZSWIM8A7E2V4 1837 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 SELLP14151 372 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 SIGLEC15Q6ZMC9 328 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 NBR2O15453 112 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TRAV8-3A0A0A6YYJ7 113 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
VPS13A-203ENST00000360280 GFI1BQ5VTD9 330 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 A0A087WX48 190 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 IGHV3-23P01764 117 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 TRACP01848 142 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 CD5P06127 495 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 MIR17HGQ75NE6 70 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 RLFQ13129 1914 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 A6NNC1 897 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 ZNRF1Q8ND25 227 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 SP9P0CG40 484 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 PEBP1P30086 187 aaKnown RBP7.81□□□□□ -1.16
VPS13A-203ENST00000360280 GUSBP1Q15486 140 aa7.81□□□□□ -1.16
VPS13A-203ENST00000360280 C1orf162Q8NEQ5 155 aaPredicted RBP7.81□□□□□ -1.16
VPS13A-203ENST00000360280 ABCA7Q8IZY2 2146 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 IFITM1P13164 125 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 APOBEC3AP31941 199 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-203ENST00000360280 C1orf194Q5T5A4 169 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 SPRED2Q7Z698 418 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 PLA2G2FQ9BZM2 168 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 SPTBN2O15020 2390 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 UMODP07911 640 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 OR9G9P0C7N8 305 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 SLC25A39Q9BZJ4 359 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-203ENST00000360280 GNG5P63218 68 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 FOXL1Q12952 345 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 ZXDCQ2QGD7 858 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-203ENST00000360280 OVOL1O14753 267 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 EFEMP2O95967 443 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 GLRXP35754 106 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 ACTL10Q5JWF8 245 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 PLAC1Q9HBJ0 212 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 CD300EQ496F6 205 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-203ENST00000360280 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 AMELYQ99218 206 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 GP6Q9HCN6 339 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 PROB1E7EW31 1015 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 Q5BKY6 102 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 RPRMLQ8N4K4 120 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 ANAPC10Q9UM13 185 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 HIST3H2BBQ8N257 126 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 ZNF525Q8N782 197 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 INS-IGF2F8WCM5 200 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 INSP01308 110 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 CCL1P22362 96 aa7.8□□□□□ -1.16
VPS13A-203ENST00000360280 IGFBP6P24592 240 aaPredicted RBP7.8□□□□□ -1.16
VPS13A-203ENST00000360280 UPK2O00526 184 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 UBL5Q9BZL1 73 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 MYMXA0A1B0GTQ4 84 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 MSGN1A6NI15 193 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 FBXL15Q9H469 300 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 ZDBF2Q9HCK1 2354 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 ERCC8Q13216 396 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 HTN3P15516 51 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 HAPLN4Q86UW8 402 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 SOCS3O14543 225 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 ADAMTSL5Q6ZMM2 481 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 LIMS2Q7Z4I7 341 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 FGF11Q92914 225 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 C17orf98A8MV24 154 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 VDAC2P45880 294 aaPredicted RBP7.79□□□□□ -1.16
VPS13A-203ENST00000360280 PMVKQ15126 192 aa7.79□□□□□ -1.16
VPS13A-203ENST00000360280 SAA2-SAA4A0A096LPE2 208 aa7.78□□□□□ -1.16
VPS13A-203ENST00000360280 SAA2P0DJI9 122 aaPredicted RBP7.78□□□□□ -1.16
VPS13A-203ENST00000360280 TIMM21Q9BVV7 248 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms