RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TGIF1Q15583 401 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 MRPL20Q9BYC9 149 aaKnown RBP8.12□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-35A0A0C4DH35 117 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 FUT5Q11128 374 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 RNF5Q99942 180 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 A0A1B0GWB2 263 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 RNF114Q9Y508 228 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 PQLC2LA1A4F0 135 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 DPM2O94777 84 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 SNRPCP09234 159 aaKnown RBP8.12□□□□□ -1.11
CUX1-203ENST00000360264 LEAP2Q969E1 77 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 KLF4O43474 513 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 FOXL2P58012 376 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 RASL11AQ6T310 242 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 M0R2P5 195 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 FAM219BQ5XKK7 198 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 COQ2Q96H96 371 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 SMPXQ9UHP9 88 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 LOC102723996A0A087X1L8 192 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 OOSP1A8MZH6 123 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-23P01764 117 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 FOXJ2Q9P0K8 574 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 UPK2O00526 184 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 CA1P00915 261 aaPredicted RBP8.12□□□□□ -1.11
CUX1-203ENST00000360264 TRBV7-1A0A0A6YYK4 115 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 MSGN1A6NI15 193 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 ABHD17AQ96GS6 310 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 H3BTX0 84 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 IL18BPO95998 194 aa8.12□□□□□ -1.11
CUX1-203ENST00000360264 IGHV1-2P23083 117 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 ATP1A1-AS1Q5TC04 95 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 PCDH15Q96QU1 1955 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3OR16-10A0A075B7F0 116 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 E9PLN8 166 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 MDKP21741 143 aaPredicted RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 WDYHV1Q96HA8 205 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 VKORC1Q9BQB6 163 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 CTAG1AP78358 180 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 FAM27E3Q08E93 113 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 NLRC5Q86WI3 1866 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 MPTX1A8MV57 137 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 ORMDL2Q53FV1 153 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 RNF125Q96EQ8 232 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 TRAV40A0A0B4J280 105 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 CEACAM8P31997 349 aaPredicted RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 LINC01590Q5TEZ4 76 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 MINOS1Q5TGZ0 78 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 CHCHD1Q96BP2 118 aaKnown RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 MGST2Q99735 147 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 MINOS1-NBL1R4GNA1 71 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 COL11A2P13942 1736 aaPredicted RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 NHLRC3Q5JS37 347 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 CARHSP1Q9Y2V2 147 aaKnown RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 EFNB1P98172 346 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 OVOL1O14753 267 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
CUX1-203ENST00000360264 ZNF497Q6ZNH5 498 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 DMRTA2Q96SC8 542 aa8.11□□□□□ -1.11
CUX1-203ENST00000360264 NAT1P18440 290 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 PRDM13Q9H4Q3 707 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 FRMPD3Q5JV73 1810 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 C5orf30Q96GV9 206 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 C1QTNF4Q9BXJ3 329 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 DENND4CQ5VZ89 1909 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
CUX1-203ENST00000360264 FAM89BQ8N5H3 189 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-49A0A0A0MS15 119 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 UMODP07911 640 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 APOMO95445 188 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 IGHV3-48P01763 117 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 SIGLEC15Q6ZMC9 328 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 TEX43Q6ZNM6 134 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 TBL2Q9Y4P3 447 aaKnown RBP8.1□□□□□ -1.11
CUX1-203ENST00000360264 KIAA1644Q3SXP7 199 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 TFF3Q07654 80 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 SRSF6Q13247 344 aaKnown RBP8.1□□□□□ -1.11
CUX1-203ENST00000360264 LAGE3Q14657 143 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 CGAP01215 116 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 TIMP3P35625 211 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 SLC25A48Q6ZT89 311 aaKnown RBP8.1□□□□□ -1.11
CUX1-203ENST00000360264 GATA3P23771 443 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 EGR4Q05215 589 aa8.1□□□□□ -1.11
CUX1-203ENST00000360264 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
CUX1-203ENST00000360264 TMEM133Q9H2Q1 129 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 HOXD3P31249 432 aaPredicted RBP8.09□□□□□ -1.11
CUX1-203ENST00000360264 LRRC37AA6NMS7 1700 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 RFLNBQ8N5W9 214 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 C18orf12Q96KH6 178 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 TRGV9Q99603 122 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 CD33P20138 364 aa8.09□□□□□ -1.11
CUX1-203ENST00000360264 PLEKHB2Q96CS7 222 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms